Method
Efficient mapping of accurate long reads in minimizer space with mapquik
- First Published June 30, 2023
RECOMB 2022 Special/Methods
Assembler artifacts include misassembly because of unsafe unitigs and underassembly because of bidirected graphs
- First Published July 27, 2022
Review
k-mers for querying large collections of sequencing data sets" > Data structures based on k-mers for querying large collections of sequencing data sets
- First Published December 16, 2020
Method
A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y
- First Published March 2, 2016
Method
Accurate typing of short tandem repeats from genome-wide sequencing data and its applications
- First Published March 30, 2015
Resource
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
- First Published September 5, 2012
Research
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
- First Published September 5, 2012
Research
Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells
- First Published November 16, 2011
Resource
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
- First Published July 12, 2011