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A graph neural network model to estimate cell-wise metabolic flux using single-cell RNA-seq data

  • First Published July 22, 2021

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

  • First Published September 5, 2012

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

  • First Published September 5, 2012

Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells

  • First Published November 16, 2011

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

  • First Published July 12, 2011

Efficient storage of high throughput DNA sequencing data using reference-based compression

  • First Published January 18, 2011

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

  • First Published November 24, 2010

The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance

  • First Published April 29, 2010

An effective model for natural selection in promoters

  • First Published March 1, 2010

A new strategy for genome assembly using short sequence reads and reduced representation libraries

  • First Published February 1, 2010
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