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Your search for returned 57 results

Research

Integrating short-read and long-read single-cell RNA sequencing for comprehensive transcriptome profiling in mouse retina

Meng Wang
Yumei Li
Jun Wang
Soo Hwan Oh
Yexuan Cao
Rui Chen

First Published March 6, 2025

Method

A deconvolution framework that uses single-cell sequencing plus a small benchmark data set for accurate analysis of cell type ratios in complex tissue samples

Shuai Guo
Xiaoqian Liu
Xuesen Cheng
Yujie Jiang
Shuangxi Ji
Qingnan Liang Andrew Koval Yumei Li Leah A. Owen Ivana K. Kim Ana Aparicio Sanghoon Lee Anil K. Sood Scott Kopetz John Paul Shen
... [+10 authors] ...,
John N. Weinstein
Margaret M. DeAngelis
Rui Chen
Wenyi Wang

First Published November 25, 2024

Research

Whole-genome resequencing of temporally stratified samples reveals substantial loss of haplotype diversity in the highly inbred Scandinavian wolf population

Agnese Viluma
Øystein Flagstad
Mikael Åkesson
Camilla Wikenros
Håkan Sand
Petter Wabakken
Hans Ellegren

First Published February 8, 2022

Research

Ficedula flycatchers and their naturally occurring F₁ hybrids" > Tissue-specific patterns of regulatory changes underlying gene expression differences among Ficedula flycatchers and their naturally occurring F₁ hybrids

Carina F. Mugal
Mi Wang
Niclas Backström
David Wheatcroft
Murielle Ålund
Marie Sémon
... [+1 authors] ...,
S. Eryn McFarlane
Ludovic Dutoit
Anna Qvarnström
Hans Ellegren

First Published November 3, 2020

Research

Macaca mulatta) based on whole-genome sequences" > The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences

Cheng Xue
Muthuswamy Raveendran
R. Alan Harris
Gloria L. Fawcett
Xiaoming Liu
Simon White Mahmoud Dahdouli David Rio Deiros Jennifer E. Below William Salerno Laura Cox Guoping Fan Betsy Ferguson Julie Horvath Zach Johnson Sree Kanthaswamy H. Michael Kubisch Dahai Liu Michael Platt David G. Smith Binghua Sun Eric J. Vallender Feng Wang Roger W. Wiseman Rui Chen
... [+20 authors] ...,
Donna M. Muzny
Richard A. Gibbs
Fuli Yu
Jeffrey Rogers

First Published October 17, 2016

Research

Direct estimate of the rate of germline mutation in a bird

Linnéa Smeds
Anna Qvarnström
Hans Ellegren

First Published July 13, 2016

Method

Integrative subcellular proteomic analysis allows accurate prediction of human disease-causing genes

Li Zhao
Yiyun Chen
Amol Onkar Bajaj
Aiden Eblimit
Mingchu Xu
Zachry T. Soens Feng Wang Zhongqi Ge Sung Yun Jung Feng He
... [+5 authors] ...,
Yumei Li
Theodore G. Wensel
Jun Qin
Rui Chen

First Published February 24, 2016

Research

Ficedula flycatchers" > Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers

Reto Burri
Alexander Nater
Takeshi Kawakami
Carina F. Mugal
Pall I. Olason
Linnea Smeds Alexander Suh Ludovic Dutoit Stanislav Bureš Laszlo Z. Garamszegi Silje Hogner Juan Moreno Anna Qvarnström Milan Ružić
... [+9 authors] ...,
Stein-Are Sæther
Glenn-Peter Sætre
Janos Török
Hans Ellegren

First Published September 9, 2015

Method

Drosophila melanogaster" > Large-scale identification of chemically induced mutations in Drosophila melanogaster

Nele A. Haelterman
Lichun Jiang
Yumei Li
Vafa Bayat
Hector Sandoval
Berrak Ugur Kai Li Tan Ke Zhang Danqing Bei Bo Xiong Wu-Lin Charng Theodore Busby Adeel Jawaid Gabriela David Manish Jaiswal
... [+10 authors] ...,
Koen J.T. Venken
Shinya Yamamoto
Rui Chen
Hugo J. Bellen

First Published September 25, 2014

Research

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

Chao Cheng
Roger Alexander
Renqiang Min
Jing Leng
Kevin Y. Yip
Joel Rozowsky Koon-Kiu Yan Xianjun Dong Sarah Djebali Yijun Ruan Carrie A. Davis Piero Carninci Timo Lassman Thomas R. Gingeras Roderic Guigó
... [+10 authors] ...,
Ewan Birney
Zhiping Weng
Michael Snyder
Mark Gerstein

First Published September 5, 2012

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