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Method

TITAN: inference of copy number architectures in clonal cell populations from tumor whole-genome sequence data

  • First Published July 24, 2014
Resource

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

  • First Published September 5, 2012
Research

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

  • First Published September 5, 2012
Method

Integrative analysis of genome-wide loss of heterozygosity and monoallelic expression at nucleotide resolution reveals disrupted pathways in triple-negative breast cancer

  • First Published May 25, 2012
Research

Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells

  • First Published November 16, 2011
Resource

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

  • First Published July 12, 2011
Method

Efficient storage of high throughput DNA sequencing data using reference-based compression

  • First Published January 18, 2011
Method

High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells

  • First Published November 24, 2010
Research

The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance

  • First Published April 29, 2010
RESOURCE

An effective model for natural selection in promoters

  • First Published March 1, 2010
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