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Eugene V. Koonin
Evan E. Eichler
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Richard M. Myers
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Webb Miller
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Eugene V. Koonin
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Hash functions in nucleotide sequence analysis
Ke Chen
Xiang Li
Qian Shi
Mingfu Shao
Paul Medvedev
First Published
May 4, 2026
Accurate detection of tandem repeats from error-prone sequences with EquiRep
Zhezheng Song
Tasfia Zahin
Xiang Li
Mingfu Shao
First Published
August 21, 2025
Accurate assembly of circular RNAs with TERRACE
Tasfia Zahin
Qian Shi
Xiaofei Carl Zang
Mingfu Shao
First Published
July 26, 2024
Complex selection on 5′ splice sites in intron-rich organisms
Manuel Irimia
Scott William Roy
Daniel E. Neafsey
Josep F. Abril
Jordi Garcia-Fernandez
Eugene V. Koonin
First Published
September 10, 2009
Evolution of protein domain promiscuity in eukaryotes
Malay Kumar Basu
Liran Carmel
Igor B. Rogozin
Eugene V. Koonin
First Published
January 29, 2008
Three distinct modes of intron dynamics in the evolution of eukaryotes
Liran Carmel
Yuri I. Wolf
Igor B. Rogozin
Eugene V. Koonin
First Published
May 10, 2007
Evolutionarily conserved genes preferentially accumulate introns
Liran Carmel
Igor B. Rogozin
Yuri I. Wolf
Eugene V. Koonin
First Published
May 10, 2007
Origins and impact of constraints in evolution of gene families
Boris E. Shakhnovich
Eugene V. Koonin
First Published
October 19, 2006
Coelomata and Not Ecdysozoa: Evidence From Genome-Wide Phylogenetic Analysis
Yuri I. Wolf
Igor B. Rogozin
Eugene V. Koonin
First Published
January 5, 2004
Gene Loss, Protein Sequence Divergence, Gene Dispensability, Expression Level, and Interactivity Are Correlated in Eukaryotic Evolution
Dmitri M. Krylov
Yuri I. Wolf
Igor B. Rogozin
Eugene V. Koonin
First Published
October 2, 2003
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