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Complex selection on 5′ splice sites in intron-rich organisms

Manuel Irimia
Scott William Roy
Daniel E. Neafsey
Josep F. Abril
Jordi Garcia-Fernandez
Eugene V. Koonin

First Published September 10, 2009

Evolution of protein domain promiscuity in eukaryotes

Malay Kumar Basu
Liran Carmel
Igor B. Rogozin
Eugene V. Koonin

First Published January 29, 2008

Three distinct modes of intron dynamics in the evolution of eukaryotes

Liran Carmel
Yuri I. Wolf
Igor B. Rogozin
Eugene V. Koonin

First Published May 10, 2007

Evolutionarily conserved genes preferentially accumulate introns

Liran Carmel
Igor B. Rogozin
Yuri I. Wolf
Eugene V. Koonin

First Published May 10, 2007

Origins and impact of constraints in evolution of gene families

Boris E. Shakhnovich
Eugene V. Koonin

First Published October 19, 2006

1274 Full-Open Reading Frames of Transcripts Expressed in the Developing Mouse Nervous System

Maria F. Bonaldo
Thomas B. Bair
Todd E. Scheetz
Einat Snir
Ike Akabogu
Jennifer L. Bair Brian Berger Keith Crouch Aja Davis Mari E. Eyestone Catherine Keppel Tamara A. Kucaba Mark Lebeck Jenny L. Lin Anna I.R. de Melo Joshua Rehmann Rebecca S. Reiter Kelly Schaefer Christina Smith Dylan Tack Kurtis Trout
... [+16 authors] ...,
Val C. Sheffield
Jim J-C. Lin
Thomas L. Casavant
Marcelo B. Soares

First Published October 15, 2004

High-Throughput Gene Discovery in the Rat

Todd E. Scheetz
Jennifer J. Laffin
Brian Berger
Sara Holte
Susan A. Baumes
Robert Brown Shereen Chang Justin Coco Jim Conklin Keith Crouch Micca Donohue Greg Doonan Chris Estes Mari Eyestone Katrina Fishler Jack Gardiner Lankai Guo Brad Johnson Catherine Keppel Rikki Kreger Mark Lebeck Rudy Marcelino Vladan Miljkovich Mindee Perdue Ling Qui Joshua Rehmann Rebecca S. Reiter Bridgette Rhoads Kelly Schaefer Christina Smith Ivana Sunjevaric Kurtis Trout Ning Wu Clayton L. Birkett Jared Bischof Barry Gackle Allen Gavin A. Jason Grundstad Brian Mokrzycki Chris Moressi Brian O'Leary Kevin Pedretti Chad Roberts Natalie L. Robinson Michael Smith Dylan Tack Nishank Trivedi Tamara Kucaba Tom Freeman Jim J.-C. Lin
... [+45 authors] ...,
Maria F. Bonaldo
Thomas L. Casavant
Val C. Sheffield
M. Bento Soares

First Published April 1, 2004

Coelomata and Not Ecdysozoa: Evidence From Genome-Wide Phylogenetic Analysis

Yuri I. Wolf
Igor B. Rogozin
Eugene V. Koonin

First Published January 5, 2004

Gene Loss, Protein Sequence Divergence, Gene Dispensability, Expression Level, and Interactivity Are Correlated in Eukaryotic Evolution

Dmitri M. Krylov
Yuri I. Wolf
Igor B. Rogozin
Eugene V. Koonin

First Published October 2, 2003

The Role of Lineage-Specific Gene Family Expansion in the Evolution of Eukaryotes

Olivier Lespinet
Yuri I. Wolf
Eugene V. Koonin
L. Aravind

First Published July 1, 2002

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