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Method

Accessible Region Conformation Capture (ARC-C) gives high-resolution insights into genome architecture and regulation

  • Ni Huang
  • Wei Qiang Seow
  • Alex Appert
  • Yan Dong
  • Przemyslaw Stempor
  • Julie Ahringer
  • First Published December 21, 2021
Research

C. elegans" > Distinctive regulatory architectures of germline-active and somatic genes in C. elegans

  • Jacques Serizay
  • Yan Dong
  • Jürgen Jänes
  • Michael Chesney
  • Chiara Cerrato
  • Julie Ahringer
  • First Published October 22, 2020
Research

C. elegans and humans" > Extreme HOT regions are CpG-dense promoters in C. elegans and humans

  • Ron A.-J. Chen
  • Przemyslaw Stempor
  • Thomas A. Down
  • Eva Zeiser
  • Sky K. Feuer
  • Julie Ahringer
  • First Published March 20, 2014
Resource

C. elegans reveals promoter and enhancer architectures" > The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures

  • Ron A.-J. Chen
  • Thomas A. Down
  • Przemyslaw Stempor
  • Q. Brent Chen
  • Thea A. Egelhofer
  • LaDeana W. Hillier
  • Tess E. Jeffers
  • Julie Ahringer
  • First Published April 2, 2013
Research

C. elegans" > Broad chromosomal domains of histone modification patterns in C. elegans

  • Tao Liu
  • Andreas Rechtsteiner
  • Thea A. Egelhofer
  • Anne Vielle
  • Isabel Latorre
  • Ming-Sin Cheung Sevinc Ercan Kohta Ikegami Morten Jensen Paulina Kolasinska-Zwierz Heidi Rosenbaum Hyunjin Shin Scott Taing Teruaki Takasaki A. Leonardo Iniguez Arshad Desai Abby F. Dernburg Hiroshi Kimura
  • ... [+13 authors] ...,
  • Jason D. Lieb
  • Julie Ahringer
  • Susan Strome
  • X. Shirley Liu
  • First Published December 22, 2010
Letter

Complex selection on 5′ splice sites in intron-rich organisms

  • Manuel Irimia
  • Scott William Roy
  • Daniel E. Neafsey
  • Josep F. Abril
  • Jordi Garcia-Fernandez
  • Eugene V. Koonin
  • First Published September 10, 2009
LETTER

Evolution of protein domain promiscuity in eukaryotes

  • Malay Kumar Basu
  • Liran Carmel
  • Igor B. Rogozin
  • Eugene V. Koonin
  • First Published January 29, 2008
LETTER

Three distinct modes of intron dynamics in the evolution of eukaryotes

  • Liran Carmel
  • Yuri I. Wolf
  • Igor B. Rogozin
  • Eugene V. Koonin
  • First Published May 10, 2007
LETTER

Evolutionarily conserved genes preferentially accumulate introns

  • Liran Carmel
  • Igor B. Rogozin
  • Yuri I. Wolf
  • Eugene V. Koonin
  • First Published May 10, 2007
LETTER

Origins and impact of constraints in evolution of gene families

  • Boris E. Shakhnovich
  • Eugene V. Koonin
  • First Published October 19, 2006
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