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Method

Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC

  • First Published April 10, 2025
Research

Sequence determinants of polyadenylation-mediated regulation

  • First Published September 17, 2019
Research

Systematic interrogation of human promoters

  • First Published January 8, 2019
Resource

Inversion variants in human and primate genomes

  • First Published May 18, 2018
Corrigendum

Corrigendum: Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

  • First Published March 1, 2017
Research

Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

  • First Published December 13, 2016
Research

Noise in gene expression is coupled to growth rate

  • First Published September 9, 2015
Corrigendum

Corrigendum: Unraveling determinants of transcription factor binding outside the core binding site

  • First Published September 1, 2015
Research

Core promoter sequence in yeast is a major determinant of expression level

  • First Published May 12, 2015
Method

Unraveling determinants of transcription factor binding outside the core binding site

  • First Published March 11, 2015
Research

Molecular dissection of the genetic mechanisms that underlie expression conservation in orthologous yeast ribosomal promoters

  • First Published October 7, 2014
Method

Probing the effect of promoters on noise in gene expression using thousands of designed sequences

  • First Published July 16, 2014
Resource

Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach

  • First Published August 15, 2013
Research

Two DNA-encoded strategies for increasing expression with opposing effects on promoter dynamics and transcriptional noise

  • First Published February 12, 2013
Resource

A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons

  • First Published August 14, 2012
Research

Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters

  • First Published October 18, 2011
Research

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

  • First Published June 17, 2011
Research

C. elegans" > High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans

  • First Published December 22, 2010
Research

Overlapping codes within protein-coding sequences

  • First Published September 14, 2010
Research

p53 binds preferentially to genomic regions with high DNA-encoded nucleosome occupancy

  • First Published August 17, 2010
Methods

Incorporating nucleosomes into thermodynamic models of transcription regulation

  • First Published May 18, 2009
Letter

Evolutionary descent of a human chromosome 6 neocentromere: A jump back to 17 million years ago

  • First Published May 1, 2009
RESOURCE

Hylobates and Nomascus Gibbons by high-resolution synteny mapping" > Tracking the complex flow of chromosome rearrangements from the Hominoidea Ancestor to extant Hylobates and Nomascus Gibbons by high-resolution synteny mapping

  • First Published June 13, 2008
Methods

cis-regulatory motifs in human core promoters" > Systematic functional characterization of cis-regulatory motifs in human core promoters

  • First Published February 6, 2008
RESOURCE

Molecular refinement of gibbon genome rearrangements

  • First Published December 21, 2006
PERSPECTIVE

Ancestral genomes reconstruction: An integrated, multi-disciplinary approach is needed

  • First Published October 19, 2006
LETTER

Recurrent Sites for New Centromere Seeding

  • First Published September 1, 2004
ARTICLE

Large-Scale Variation Among Human and Great Ape Genomes Determined by Array Comparative Genomic Hybridization

  • First Published March 1, 2003
LETTER

Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25

  • First Published January 1, 2003
LETTER

KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms" > Human Paralogs of KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms

  • First Published January 1, 2002
LETTER

Differential Divergence of Three Human Pseudoautosomal Genes and Their Mouse Homologs: Implications for Sex Chromosome Evolution

  • First Published December 1, 2001
LETTER

Centromere Emergence in Evolution

  • First Published April 1, 2001
LETTER

Centromere Repositioning

  • First Published December 1, 1999
ARTICLE

CAGGG Repeats and the Pericentromeric Duplication of the Hominoid Genome

  • First Published November 1, 1999
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