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Research

Dynamic A-to-I RNA editing in response to gut microbiome in honey bees

  • Yuange Duan
  • Min Huang
  • Lin Ye
  • Ling Ma
  • Yashuai Wu
  • Yating Du Jiyao Liu Fan Song Li Tian
  • ... [+4 authors] ...,
  • Wanzhi Cai
  • Hu Li
  • Xin Zhou
  • Shiqi Luo
  • First Published March 4, 2026
Method

Accurate estimation of intraspecific microbial gene content variation in metagenomic data with MIDAS v3 and StrainPGC

  • Byron J. Smith
  • Chunyu Zhao
  • Veronika Dubinkina
  • Xiaofan Jin
  • Liron Zahavi
  • Saar Shoer
  • Jacqueline Moltzau-Anderson
  • Eran Segal
  • Katherine S. Pollard
  • First Published April 10, 2025
Research

Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation

  • Vanessa L. Porter
  • Michelle Ng
  • Kieran O'Neill
  • Signe MacLennan
  • Richard D. Corbett
  • Luka Culibrk Zeid Hamadeh Marissa Iden Rachel Schmidt Shirng-Wern Tsaih Carolyn Nakisige Martin Origa Jackson Orem Glenn Chang Jeremy Fan Ka Ming Nip Vahid Akbari Simon K. Chan James Hopkins Richard A. Moore Eric Chuah Karen L. Mungall Andrew J. Mungall
  • ... [+18 authors] ...,
  • Inanc Birol
  • Steven J.M. Jones
  • Janet S. Rader
  • Marco A. Marra
  • First Published December 5, 2024
Method

Simultaneous profiling of host expression and microbial abundance by spatial metatranscriptome sequencing

  • Lin Lyu
  • Xue Li
  • Ru Feng
  • Xin Zhou
  • Tuhin K. Guha
  • Xiaofei Yu Guo Qiang Chen Yufeng Yao
  • ... [+3 authors] ...,
  • Bing Su
  • Duowu Zou
  • Michael P. Snyder
  • Lei Chen
  • First Published March 27, 2023
Resource

Precision environmental health monitoring by longitudinal exposome and multi-omics profiling

  • Peng Gao
  • Xiaotao Shen
  • Xinyue Zhang
  • Chao Jiang
  • Sai Zhang
  • Xin Zhou
  • Sophia Miryam Schüssler-Fiorenza Rose
  • Michael Snyder
  • First Published June 6, 2022
Research

Sequence determinants of polyadenylation-mediated regulation

  • Ilya Vainberg Slutskin
  • Adina Weinberger
  • Eran Segal
  • First Published September 17, 2019
Resource

Pediatric Cancer Variant Pathogenicity Information Exchange (PeCanPIE): a cloud-based platform for curating and classifying germline variants

  • Michael N. Edmonson
  • Aman N. Patel
  • Dale J. Hedges
  • Zhaoming Wang
  • Evadnie Rampersaud
  • Chimene A. Kesserwan Xin Zhou Yanling Liu Scott Newman Michael C. Rusch Clay L. McLeod Mark R. Wilkinson Stephen V. Rice Thierry Soussi J. Paul Taylor Michael Benatar Jared B. Becksfort
  • ... [+12 authors] ...,
  • Kim E. Nichols
  • Leslie L. Robison
  • James R. Downing
  • Jinghui Zhang
  • First Published August 22, 2019
Research

High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma

  • Michael J. Johnston
  • Ana Nikolic
  • Nicoletta Ninkovic
  • Paul Guilhamon
  • Florence M.G. Cavalli
  • Steven Seaman Franz J. Zemp John Lee Aly Abdelkareem Katrina Ellestad Alex Murison Michelle M. Kushida Fiona J. Coutinho Yussanne Ma Andrew J. Mungall Richard Moore Marco A. Marra Michael D. Taylor Peter B. Dirks Trevor J. Pugh Sorana Morrissy
  • ... [+16 authors] ...,
  • Bradley St Croix
  • Douglas J. Mahoney
  • Mathieu Lupien
  • Marco Gallo
  • First Published June 27, 2019
Research

Systematic interrogation of human promoters

  • Shira Weingarten-Gabbay
  • Ronit Nir
  • Shai Lubliner
  • Eilon Sharon
  • Yael Kalma
  • Adina Weinberger
  • Eran Segal
  • First Published January 8, 2019
Corrigendum

Corrigendum: Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

  • David van Dijk
  • Eilon Sharon
  • Maya Lotan-Pompan
  • Adina Weinberger
  • Eran Segal
  • Lucas B. Carey
  • First Published March 1, 2017
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