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Resource

Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis

  • Chirag Nepal
  • Yavor Hadzhiev
  • Christopher Previti
  • Vanja Haberle
  • Nan Li
  • Hazuki Takahashi Ana Maria M. Suzuki Ying Sheng Rehab F. Abdelhamid Santosh Anand Jochen Gehrig Altuna Akalin Christel E.M. Kockx Antoine A.J. van der Sloot Wilfred F.J. van IJcken Olivier Armant Sepand Rastegar Craig Watson Uwe Strähle
  • ... [+14 authors] ...,
  • Elia Stupka
  • Piero Carninci
  • Boris Lenhard
  • Ferenc Müller
  • First Published September 3, 2013
Research

Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors

  • Andrew Feber
  • Gareth A. Wilson
  • Lu Zhang
  • Nadege Presneau
  • Bernadine Idowu
  • Thomas A. Down Vardhman K. Rakyan Luke A. Noon Alison C. Lloyd Elia Stupka Vassia Schiza
  • ... [+6 authors] ...,
  • Andrew E. Teschendorff
  • Gary P. Schroth
  • Adrienne Flanagan
  • Stephan Beck
  • First Published February 1, 2011
RESOURCE

C. savignyi genetic map and its integration with the reference sequence facilitates insights into chordate genome evolution" > The C. savignyi genetic map and its integration with the reference sequence facilitates insights into chordate genome evolution

  • Matthew M. Hill
  • Karl W. Broman
  • Elia Stupka
  • William C. Smith
  • Di Jiang
  • Arend Sidow
  • First Published June 2, 2008
LETTER

A novel view of the transcriptome revealed from gene trapping in mouse embryonic stem cells

  • Guglielmo Roma
  • Gilda Cobellis
  • Pamela Claudiani
  • Francesco Maione
  • Pedro Cruz
  • Gaetano Tripoli
  • Marco Sardiello
  • Ivana Peluso
  • Elia Stupka
  • First Published May 31, 2007
Methods

Biopipe: A Flexible Framework for Protocol-Based Bioinformatics Analysis

  • Shawn Hoon
  • Kiran Kumar Ratnapu
  • Jer-ming Chia
  • Balamurugan Kumarasamy
  • Xiao Juguang
  • Michele Clamp
  • ... [+1 authors] ...,
  • Arne Stabenau
  • Simon Potter
  • Laura Clarke
  • Elia Stupka
  • First Published July 17, 2003
RESOURCE

The Bioperl Toolkit: Perl Modules for the Life Sciences

  • Jason E. Stajich
  • David Block
  • Kris Boulez
  • Steven E. Brenner
  • Stephen A. Chervitz
  • Chris Dagdigian Georg Fuellen James G.R. Gilbert Ian Korf Hilmar Lapp Heikki Lehväslaiho Chad Matsalla Chris J. Mungall Brian I. Osborne Matthew R. Pocock Peter Schattner Martin Senger
  • ... [+12 authors] ...,
  • Lincoln D. Stein
  • Elia Stupka
  • Mark D. Wilkinson
  • Ewan Birney
  • First Published October 1, 2002
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