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Resource

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

Guanjue Xiang
Xi He
Belinda M. Giardine
Kathryn J. Isaac
Dylan J. Taylor
Rajiv C. McCoy Camden Jansen Cheryl A. Keller Alexander Q. Wixom April Cockburn Amber Miller Qian Qi Yanghua He Yichao Li Jens Lichtenberg Elisabeth F. Heuston Stacie M. Anderson Jing Luan Marit W. Vermunt Feng Yue Michael E.G. Sauria Michael C. Schatz James Taylor Berthold Göttgens Jim R. Hughes Douglas R. Higgs Mitchell J. Weiss Yong Cheng Gerd A. Blobel David M. Bodine
... [+25 authors] ...,
Yu Zhang
Qunhua Li
Shaun Mahony
Ross C. Hardison

First Published July 1, 2024

Resource

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

Guanjue Xiang
Cheryl A. Keller
Elisabeth Heuston
Belinda M. Giardine
Lin An
Alexander Q. Wixom Amber Miller April Cockburn Michael E.G. Sauria Kathryn Weaver Jens Lichtenberg Berthold Göttgens Qunhua Li David Bodine Shaun Mahony James Taylor Gerd A. Blobel Mitchell J. Weiss Yong Cheng Feng Yue
... [+15 authors] ...,
Jim Hughes
Douglas R. Higgs
Yu Zhang
Ross C. Hardison

First Published March 4, 2020

Research

Systematic interrogation of human promoters

Shira Weingarten-Gabbay
Ronit Nir
Shai Lubliner
Eilon Sharon
Yael Kalma
Adina Weinberger
Eran Segal

First Published January 8, 2019

Corrigendum

Corrigendum: Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

David van Dijk
Eilon Sharon
Maya Lotan-Pompan
Adina Weinberger
Eran Segal
Lucas B. Carey

First Published March 1, 2017

Research

Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

David van Dijk
Eilon Sharon
Maya Lotan-Pompan
Adina Weinberger
Eran Segal
Lucas B. Carey

First Published December 13, 2016

Corrigendum

Corrigendum: Unraveling determinants of transcription factor binding outside the core binding site

Michal Levo
Einat Zalckvar
Eilon Sharon
Ana Carolina Dantas Machado
Yael Kalma
Maya Lotan-Pompan
... [+1 authors] ...,
Adina Weinberger
Zohar Yakhini
Remo Rohs
Eran Segal

First Published September 1, 2015

Method

Unraveling determinants of transcription factor binding outside the core binding site

Michal Levo
Einat Zalckvar
Eilon Sharon
Ana Carolina Dantas Machado
Yael Kalma
Maya Lotam-Pompan
... [+1 authors] ...,
Adina Weinberger
Zohar Yakhini
Remo Rohs
Eran Segal

First Published March 11, 2015

Method

Probing the effect of promoters on noise in gene expression using thousands of designed sequences

Eilon Sharon
David van Dijk
Yael Kalma
Leeat Keren
Ohad Manor
Zohar Yakhini
Eran Segal

First Published July 16, 2014

Resource

Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach

Pablo Meyer
Geoffrey Siwo
Danny Zeevi
Eilon Sharon
Raquel Norel
Eran Segal Gustavo Stolovitzky Geoffrey Siwo Andrew K. Rider Asako Tan Richard S. Pinapati Scott Emrich Nitesh Chawla Michael T. Ferdig Yi-An Tung Yong-Syuan Chen Mei-Ju May Chen Chien-Yu Chen Jason M. Knight Sayed Mohammad Ebrahim Sahraeian Mohammad Shahrokh Esfahani Rene Dreos Philipp Bucher Ezekiel Maier Yvan Saeys Ewa Szczurek Alena Myšičková Martin Vingron Holger Klein Szymon M. Kiełbasa Jeff Knisley Jeff Bonnell Debra Knisley Miron B. Kursa Witold R. Rudnicki Madhuchhanda Bhattacharjee Mikko J. Sillanpää James Yeung Pieter Meysman Aminael Sánchez Rodríguez Kristof Engelen Kathleen Marchal Yezhou Huang
... [+38 authors] ...,
Fantine Mordelet
Alexander Hartemink
Luca Pinello
Guo-Cheng Yuan

First Published August 15, 2013

Resource

Annotation of functional variation in personal genomes using RegulomeDB

Alan P. Boyle
Eurie L. Hong
Manoj Hariharan
Yong Cheng
Marc A. Schaub
Maya Kasowski Konrad J. Karczewski Julie Park
... [+3 authors] ...,
Benjamin C. Hitz
Shuai Weng
J. Michael Cherry
Michael Snyder

First Published September 5, 2012

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