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Methods

Predicting tissue-specific enhancers in the human genome

  • Len A. Pennacchio
  • Gabriela G. Loots
  • Marcelo A. Nobrega
  • Ivan Ovcharenko
  • First Published January 8, 2007
Methods

High-throughput DNA methylation profiling using universal bead arrays

  • Marina Bibikova
  • Zhenwu Lin
  • Lixin Zhou
  • Eugene Chudin
  • Eliza Wickham Garcia
  • Bonnie Wu Dennis Doucet Neal J. Thomas Yunhua Wang Ekkehard Vollmer Torsten Goldmann Carola Seifart Wei Jiang
  • ... [+8 authors] ...,
  • David L. Barker
  • Mark S. Chee
  • Joanna Floros
  • Jian-Bing Fan
  • First Published January 31, 2006
LETTER

Genomic deletion of a long-range bone enhancer misregulates sclerostin in Van Buchem disease

  • Gabriela G. Loots
  • Michaela Kneissel
  • Hansjoerg Keller
  • Myma Baptist
  • Jessie Chang
  • Nicole M. Collette
  • Dmitriy Ovcharenko
  • Ingrid Plajzer-Frick
  • Edward M. Rubin
  • First Published June 17, 2005
Chicken Special/Resources

Mulan: Multiple-sequence local alignment and visualization for studying function and evolution

  • Ivan Ovcharenko
  • Gabriela G. Loots
  • Belinda M. Giardine
  • Minmei Hou
  • Jian Ma
  • Ross C. Hardison
  • Lisa Stubbs
  • Webb Miller
  • First Published December 8, 2004
Chicken Special/Letters

Evolution and functional classification of vertebrate gene deserts

  • Ivan Ovcharenko
  • Gabriela G. Loots
  • Marcelo A. Nobrega
  • Ross C. Hardison
  • Webb Miller
  • Lisa Stubbs
  • First Published December 8, 2004
RESOURCE

eShadow: A Tool for Comparing Closely Related Sequences

  • Ivan Ovcharenko
  • Dario Boffelli
  • Gabriela G. Loots
  • First Published June 1, 2004
Methods

A Versatile Assay for High-Throughput Gene Expression Profiling on Universal Array Matrices

  • Jian-Bing Fan
  • Joanne M. Yeakley
  • Marina Bibikova
  • Eugene Chudin
  • Eliza Wickham
  • Jing Chen Dennis Doucet Philippe Rigault Baohong Zhang Richard Shen Celeste McBride Hai-Ri Li
  • ... [+7 authors] ...,
  • Xiang-Dong Fu
  • Arnold Oliphant
  • David L. Barker
  • Mark S. Chee
  • First Published May 3, 2004
Methods

Decoding Randomly Ordered DNA Arrays

  • Kevin L. Gunderson
  • Semyon Kruglyak
  • Michael S. Graige
  • Francisco Garcia
  • Bahram G. Kermani
  • Chanfeng Zhao Diping Che Todd Dickinson Eliza Wickham Jim Bierle Dennis Doucet Monika Milewski Robert Yang Chris Siegmund Juergen Haas Lixin Zhou
  • ... [+11 authors] ...,
  • Arnold Oliphant
  • Jian-Bing Fan
  • Steven Barnard
  • Mark S. Chee
  • First Published April 12, 2004
RESOURCE

zPicture: Dynamic Alignment and Visualization Tool for Analyzing Conservation Profiles

  • Ivan Ovcharenko
  • Gabriela G. Loots
  • Ross C. Hardison
  • Webb Miller
  • Lisa Stubbs
  • First Published March 1, 2004
METHODS

rVista for Comparative Sequence-Based Discovery of Functional Transcription Factor Binding Sites" > rVista for Comparative Sequence-Based Discovery of Functional Transcription Factor Binding Sites

  • Gabriela G. Loots
  • Ivan Ovcharenko
  • Lior Pachter
  • Inna Dubchak
  • Edward M. Rubin
  • First Published April 12, 2002
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