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Research

RNA Pol II–dependent transcription efficiency fine-tunes A-to-I editing levels

  • Brigitta Szabo
  • Therese C. Mandl
  • Bernhard Woldrich
  • Gregor Diensthuber
  • David Martin
  • Michael F. Jantsch
  • Konstantin Licht
  • First Published March 12, 2024
Research

ADAR-deficiency perturbs the global splicing landscape in mouse tissues

  • Utkarsh Kapoor
  • Konstantin Licht
  • Fabian Amman
  • Tobias Jakobi
  • David Martin
  • Christoph Dieterich
  • Michael F. Jantsch
  • First Published July 29, 2020
Research

A high resolution A-to-I editing map in the mouse identifies editing events controlled by pre-mRNA splicing

  • Konstantin Licht
  • Utkarsh Kapoor
  • Fabian Amman
  • Ernesto Picardi
  • David Martin
  • Prajakta Bajad
  • Michael F. Jantsch
  • First Published August 19, 2019
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Resource

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

  • Thomas Derrien
  • Rory Johnson
  • Giovanni Bussotti
  • Andrea Tanzer
  • Sarah Djebali
  • Hagen Tilgner Gregory Guernec David Martin Angelika Merkel David G. Knowles Julien Lagarde Lavanya Veeravalli Xiaoan Ruan Yijun Ruan Timo Lassmann Piero Carninci James B. Brown Leonard Lipovich Jose M. Gonzalez Mark Thomas Carrie A. Davis Ramin Shiekhattar Thomas R. Gingeras
  • ... [+18 authors] ...,
  • Tim J. Hubbard
  • Cedric Notredame
  • Jennifer Harrow
  • Roderic Guigó
  • First Published September 5, 2012
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
LETTER

Monodelphis domestica" > Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

  • Andrew J. Gentles
  • Matthew J. Wakefield
  • Oleksiy Kohany
  • Wanjun Gu
  • Mark A. Batzer
  • David D. Pollock
  • Jerzy Jurka
  • First Published May 10, 2007
LETTER

Alu amplification" > Under the genomic radar: The Stealth model of Alu amplification

  • Kyudong Han
  • Jinchuan Xing
  • Hui Wang
  • Dale J. Hedges
  • Randall K. Garber
  • Richard Cordaux
  • Mark A. Batzer
  • First Published May 2, 2005
LETTER

Alu Mobilization and Polymorphism Among the Human and Chimpanzee Lineages" > Differential Alu Mobilization and Polymorphism Among the Human and Chimpanzee Lineages

  • Dale J. Hedges
  • Pauline A. Callinan
  • Richard Cordaux
  • Jinchuan Xing
  • Erin Barnes
  • Mark A. Batzer
  • First Published June 1, 2004
LETTER

Alu Insertion Polymorphisms" > Genetic Variation Among World Populations: Inferences From 100 Alu Insertion Polymorphisms

  • W. Scott Watkins
  • Alan R. Rogers
  • Christopher T. Ostler
  • Steve Wooding
  • Michael J. Bamshad
  • Anna-Marie E. Brassington Marion L. Carroll Son V. Nguyen Jerilyn A. Walker B.V. Ravi Prasad
  • ... [+5 authors] ...,
  • P. Govinda Reddy
  • Pradipta K. Das
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published June 12, 2003
LETTER

Y Chromosome STR Haplotypes and the Genetic Structure of U.S. Populations of African, European, and Hispanic Ancestry

  • Manfred Kayser
  • Silke Brauer
  • Hiltrud Schädlich
  • Mechthild Prinz
  • Mark A. Batzer
  • Peter A. Zimmerman
  • B. A. Boatin
  • Mark Stoneking
  • First Published April 1, 2003
REVIEW

Mammalian Retroelements

  • Prescott L. Deininger
  • Mark A. Batzer
  • First Published October 1, 2002
LETTER

Active Alu Element “A-Tails”: Size Does Matter

  • Astrid M. Roy-Engel
  • Abdel-Halim Salem
  • Oluwatosin O. Oyeniran
  • Lisa Deininger
  • Dale J. Hedges
  • Gail E. Kilroy
  • Mark A. Batzer
  • Prescott L. Deininger
  • First Published August 21, 2002
LETTER

Patterns of Human Diversity, within and among Continents, Inferred from Biallelic DNA Polymorphisms

  • Chiara Romualdi
  • David Balding
  • Ivane S. Nasidze
  • Gregory Risch
  • Myles Robichaux
  • Stephen T. Sherry
  • Mark Stoneking
  • Mark A. Batzer
  • Guido Barbujani
  • First Published April 1, 2002
LETTER

Genetic Evidence on the Origins of Indian Caste Populations

  • Michael Bamshad
  • Toomas Kivisild
  • W. Scott Watkins
  • Mary E. Dixon
  • Chris E. Ricker
  • Baskara B. Rao J. Mastan Naidu B.V. Ravi Prasad P. Govinda Reddy Arani Rasanayagam Surinder S. Papiha Richard Villems Alan J. Redd Michael F. Hammer
  • ... [+9 authors] ...,
  • Son V. Nguyen
  • Marion L. Carroll
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 8, 2001
LETTER

Reading between the LINEs: Human Genomic Variation Induced by LINE-1 Retrotransposition

  • Fang-miin Sheen
  • Stephen T. Sherry
  • Gregory M. Risch
  • Myles Robichaux
  • Ivane Nasidze
  • Mark Stoneking
  • Mark A. Batzer
  • Gary D. Swergold
  • First Published October 1, 2000
ARTICLE

Potential Gene Conversion and Source Genes for Recently Integrated Alu Elements

  • Astrid M. Roy
  • Marion L. Carroll
  • Son V. Nguyen
  • Abdel-Halim Salem
  • Michael Oldridge
  • Andrew O. M. Wilkie
  • Mark A. Batzer
  • Prescott L. Deininger
  • First Published October 1, 2000
LETTER

AluInsertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa " > AluInsertion Polymorphisms and Human Evolution: Evidence for a Larger Population Size in Africa

  • Mark Stoneking
  • Jennifer J. Fontius
  • Stephanie L. Clifford
  • Himla Soodyall
  • Santosh S. Arcot
  • Nilmani Saha
  • ... [+1 authors] ...,
  • Trefor Jenkins
  • Mohammad A. Tahir
  • Prescott L. Deininger
  • Mark A. Batzer
  • First Published November 1, 1997
INSIGHT/OUTLOOK

Modeling Human Evolution—To Tree or Not to Tree?

  • Stephen T. Sherry
  • Mark A. Batzer
  • First Published October 1, 1997
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