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Research

Replication timing networks reveal a link between transcription regulatory circuits and replication timing control

  • First Published August 21, 2019
Research

Allele-specific control of replication timing and genome organization during development

  • First Published May 7, 2018
Method

Read clouds uncover variation in complex regions of the human genome

  • First Published August 18, 2015
Research

Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells

  • First Published June 8, 2015
Research

Topologically associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication-timing program

  • First Published May 20, 2015
Method

Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression

  • First Published February 12, 2015
Method

Parente2: a fast and accurate method for detecting identity by descent

  • First Published October 1, 2014
Research

Genome evolution during progression to breast cancer

  • First Published April 8, 2013
Method

Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements

  • First Published September 5, 2012
Resource

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

  • First Published September 5, 2012
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