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Research

Leishmania" > Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

  • Matthew B. Rogers
  • James D. Hilley
  • Nicholas J. Dickens
  • Jon Wilkes
  • Paul A. Bates
  • Daniel P. Depledge David Harris Yerim Her Pawel Herzyk Hideo Imamura Thomas D. Otto Mandy Sanders Kathy Seeger Jean-Claude Dujardin
  • ... [+9 authors] ...,
  • Matthew Berriman
  • Deborah F. Smith
  • Christiane Hertz-Fowler
  • Jeremy C. Mottram
  • First Published October 28, 2011
Letter

Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype" > Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype

  • Robert A. Kingsley
  • Chisomo L. Msefula
  • Nicholas R. Thomson
  • Samuel Kariuki
  • Kathryn E. Holt
  • Melita A. Gordon David Harris Louise Clarke Sally Whitehead Vartul Sangal Kevin Marsh Mark Achtman Malcolm E. Molyneux Martin Cormican
  • ... [+9 authors] ...,
  • Julian Parkhill
  • Calman A. MacLennan
  • Robert S. Heyderman
  • Gordon Dougan
  • First Published November 9, 2009
Letter

Candida dubliniensis and Candida albicans" > Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans

  • Andrew P. Jackson
  • John A. Gamble
  • Tim Yeomans
  • Gary P. Moran
  • David Saunders
  • David Harris Martin Aslett Jamie F. Barrell Geraldine Butler Francesco Citiulo David C. Coleman Piet W.J. de Groot Tim J. Goodwin Michael A. Quail Jacqueline McQuillan Carol A. Munro Arnab Pain Russell T. Poulter Marie-Adèle Rajandream Hubert Renauld Martin J. Spiering Adrian Tivey
  • ... [+17 authors] ...,
  • Neil A.R. Gow
  • Barclay Barrell
  • Derek J. Sullivan
  • Matthew Berriman
  • First Published September 10, 2009
Letter

Functional diversity for REST (NRSF) is defined by in vivo binding affinity hierarchies at the DNA sequence level

  • Alexander W. Bruce
  • Andrés J. López-Contreras
  • Paul Flicek
  • Thomas A. Down
  • Pawandeep Dhami
  • Shane C. Dillon Christoph M. Koch
  • ... [+2 authors] ...,
  • Cordelia F. Langford
  • Ian Dunham
  • Robert M. Andrews
  • David Vetrie
  • First Published April 28, 2009
ARTICLE

Pseudomonas aeruginosa" > Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa

  • Craig Winstanley
  • Morgan G.I. Langille
  • Joanne L. Fothergill
  • Irena Kukavica-Ibrulj
  • Catherine Paradis-Bleau
  • François Sanschagrin Nicholas R. Thomson Geoff L. Winsor Michael A. Quail Nicola Lennard Alexandra Bignell Louise Clarke Kathy Seeger David Saunders David Harris
  • ... [+10 authors] ...,
  • Julian Parkhill
  • Robert E.W. Hancock
  • Fiona S.L. Brinkman
  • Roger C. Levesque
  • First Published December 1, 2008
LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
ARTICLE

Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genes

  • Alvaro Rada-Iglesias
  • Stefan Enroth
  • Adam Ameur
  • Christoph M. Koch
  • Gayle K. Clelland
  • Patricia Respuela-Alonso Sarah Wilcox Oliver M. Dovey Peter D. Ellis
  • ... [+4 authors] ...,
  • Cordelia F. Langford
  • Ian Dunham
  • Jan Komorowski
  • Claes Wadelius
  • First Published June 13, 2007
ARTICLE

The landscape of histone modifications across 1% of the human genome in five human cell lines

  • Christoph M. Koch
  • Robert M. Andrews
  • Paul Flicek
  • Shane C. Dillon
  • Ulaş Karaöz
  • Gayle K. Clelland Sarah Wilcox David M. Beare Joanna C. Fowler Phillippe Couttet Keith D. James Gregory C. Lefebvre Alexander W. Bruce Oliver M. Dovey Peter D. Ellis Pawandeep Dhami Cordelia F. Langford Zhiping Weng
  • ... [+13 authors] ...,
  • Ewan Birney
  • Nigel P. Carter
  • David Vetrie
  • Ian Dunham
  • First Published June 13, 2007
Methods

Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites

  • George A. Follows
  • Pawan Dhami
  • Berthold Göttgens
  • Alexander W. Bruce
  • Peter J. Campbell
  • Shane C. Dillon Aileen M. Smith Christoph Koch Ian J. Donaldson Mike A. Scott
  • ... [+5 authors] ...,
  • Ian Dunham
  • Mary E. Janes
  • David Vetrie
  • Anthony R. Green
  • First Published September 8, 2006
LETTER

Toxoplasma gondii" > Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii

  • Asis Khan
  • Ulrike Böhme
  • Krystyna A. Kelly
  • Ellen Adlem
  • Karen Brooks
  • Mark Simmonds Karen Mungall Michael A. Quail Claire Arrowsmith Tracey Chillingworth Carol Churcher David Harris Matthew Collins Nigel Fosker Audrey Fraser Zahra Hance Kay Jagels Sharon Moule Lee Murphy Susan O'Neil Marie-Adele Rajandream David Saunders Kathy Seeger Sally Whitehead Thomas Mayr Xuenan Xuan Junichi Watanabe Yutaka Suzuki Hiroyuki Wakaguri Sumio Sugano Chihiro Sugimoto Ian Paulsen Aaron J. Mackey David S. Roos Neil Hall
  • ... [+30 authors] ...,
  • Matthew Berriman
  • Bart Barrell
  • L. David Sibley
  • James W. Ajioka
  • First Published August 10, 2006
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