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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

  • Aaron McKenna
  • Matthew Hanna
  • Eric Banks
  • Andrey Sivachenko
  • Kristian Cibulskis
  • Andrew Kernytsky Kiran Garimella
  • ... [+2 authors] ...,
  • David Altshuler
  • Stacey Gabriel
  • Mark Daly
  • Mark A. DePristo
  • First Published July 19, 2010
RESOURCE

Whole population, genome-wide mapping of hidden relatedness

  • Alexander Gusev
  • Jennifer K. Lowe
  • Markus Stoffel
  • Mark J. Daly
  • David Altshuler
  • Jan L. Breslow
  • Jeffrey M. Friedman
  • Itsik Pe'er
  • First Published October 29, 2008
LETTER

C. elegans core neuronal protein–DNA interaction network" > Transcription factor modularity in a gene-centered C. elegans core neuronal protein–DNA interaction network

  • Vanessa Vermeirssen
  • M. Inmaculada Barrasa
  • César A. Hidalgo
  • Jenny Aurielle B. Babon
  • Reynaldo Sequerra
  • Lynn Doucette-Stamm
  • Albert-László Barabási
  • Albertha J.M. Walhout
  • First Published May 18, 2007
Methods

Calibrating a coalescent simulation of human genome sequence variation

  • Stephen F. Schaffner
  • Catherine Foo
  • Stacey Gabriel
  • David Reich
  • Mark J. Daly
  • David Altshuler
  • First Published October 26, 2005
RESOURCE

Caenorhabditis elegans Promoterome" > A First Version of the Caenorhabditis elegans Promoterome

  • Denis Dupuy
  • Qian-Ru Li
  • Bart Deplancke
  • Mike Boxem
  • Tong Hao
  • Philippe Lamesch Reynaldo Sequerra Stephanie Bosak Lynn Doucette-Stamm
  • ... [+4 authors] ...,
  • Ian A. Hope
  • David E. Hill
  • Albertha J.M. Walhout
  • Marc Vidal
  • First Published October 15, 2004
RESOURCE

Human ORFeome Version 1.1: A Platform for Reverse Proteomics

  • Jean-François Rual
  • Tomoko Hirozane-Kishikawa
  • Tong Hao
  • Nicolas Bertin
  • Siming Li
  • Amélie Dricot Ning Li Jennifer Rosenberg Philippe Lamesch Pierre-Olivier Vidalain Tracey R. Clingingsmith James L. Hartley Dominic Esposito David Cheo Troy Moore Blake Simmons Reynaldo Sequerra Stephanie Bosak Lynn Doucette-Stamm Christian Le Peuch Jean Vandenhaute
  • ... [+16 authors] ...,
  • Michael E. Cusick
  • Joanna S. Albala
  • David E. Hill
  • Marc Vidal
  • First Published October 15, 2004
RESOURCE

Brucella melitensis ORFeome Version 1.1" > Generation of the Brucella melitensis ORFeome Version 1.1

  • Amélie Dricot
  • Jean-François Rual
  • Philippe Lamesch
  • Nicolas Bertin
  • Denis Dupuy
  • Tong Hao Christophe Lambert Régis Hallez Jean-Marc Delroisse Jean Vandenhaute Ignacio Lopez-Goñi Ignacio Moriyon Juan M. Garcia-Lobo Félix J. Sangari Alastair P. MacMillan Sally J. Cutler Adrian M. Whatmore Stephanie Bozak Reynaldo Sequerra Lynn Doucette-Stamm
  • ... [+15 authors] ...,
  • Marc Vidal
  • David E. Hill
  • Jean-Jacques Letesson
  • Xavier De Bolle
  • First Published October 15, 2004
LETTER

C. elegans ORFeome Version 3.1: Increasing the Coverage of ORFeome Resources With Improved Gene Predictions" > C. elegans ORFeome Version 3.1: Increasing the Coverage of ORFeome Resources With Improved Gene Predictions

  • Philippe Lamesch
  • Stuart Milstein
  • Tong Hao
  • Jennifer Rosenberg
  • Ning Li
  • Reynaldo Sequerra Stephanie Bosak
  • ... [+2 authors] ...,
  • Lynn Doucette-Stamm
  • Jean Vandenhaute
  • David E. Hill
  • Marc Vidal
  • First Published October 15, 2004
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