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Research

Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing

Dorothee Pflueger
Stéphane Terry
Andrea Sboner
Lukas Habegger
Raquel Esgueva
Pei-Chun Lin Maria A. Svensson Naoki Kitabayashi Benjamin J. Moss Theresa Y. MacDonald Xuhong Cao Terrence Barrette Ashutosh K. Tewari Mark S. Chee Arul M. Chinnaiyan
... [+10 authors] ...,
David S. Rickman
Francesca Demichelis
Mark B. Gerstein
Mark A. Rubin

First Published October 29, 2010

Methods

Microarray-based multicycle-enrichment of genomic subsets for targeted next-generation sequencing

Daniel Summerer
Haiguo Wu
Bettina Haase
Yang Cheng
Nadine Schracke
Cord F. Stähler
Mark S. Chee
Peer F. Stähler
Markus Beier

First Published July 28, 2009

Methods

High-throughput DNA methylation profiling using universal bead arrays

Marina Bibikova
Zhenwu Lin
Lixin Zhou
Eugene Chudin
Eliza Wickham Garcia
Bonnie Wu Dennis Doucet Neal J. Thomas Yunhua Wang Ekkehard Vollmer Torsten Goldmann Carola Seifart Wei Jiang
... [+8 authors] ...,
David L. Barker
Mark S. Chee
Joanna Floros
Jian-Bing Fan

First Published January 31, 2006

ARTICLE

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

Timothy Ravasi
Harukazu Suzuki
Ken C. Pang
Shintaro Katayama
Masaaki Furuno
Rie Okunishi Shiro Fukuda Kelin Ru Martin C. Frith M. Milena Gongora
... [+5 authors] ...,
Sean M. Grimmond
David A. Hume
Yoshihide Hayashizaki
John S. Mattick

First Published December 12, 2005

Methods

A novel, high-performance random array platform for quantitative gene expression profiling

Kenneth Kuhn
Shawn C. Baker
Eugene Chudin
Minh-Ha Lieu
Steffen Oeser
Holly Bennett
... [+1 authors] ...,
Philippe Rigault
David Barker
Timothy K. McDaniel
Mark S. Chee

First Published November 1, 2004

Methods

A Versatile Assay for High-Throughput Gene Expression Profiling on Universal Array Matrices

Jian-Bing Fan
Joanne M. Yeakley
Marina Bibikova
Eugene Chudin
Eliza Wickham
Jing Chen Dennis Doucet Philippe Rigault Baohong Zhang Richard Shen Celeste McBride Hai-Ri Li
... [+7 authors] ...,
Xiang-Dong Fu
Arnold Oliphant
David L. Barker
Mark S. Chee

First Published May 3, 2004

Methods

Decoding Randomly Ordered DNA Arrays

Kevin L. Gunderson
Semyon Kruglyak
Michael S. Graige
Francisco Garcia
Bahram G. Kermani
Chanfeng Zhao Diping Che Todd Dickinson Eliza Wickham Jim Bierle Dennis Doucet Monika Milewski Robert Yang Chris Siegmund Juergen Haas Lixin Zhou
... [+11 authors] ...,
Arnold Oliphant
Jian-Bing Fan
Steven Barnard
Mark S. Chee

First Published April 12, 2004

ARTICLE

Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia

Piero Carninci
Kazunori Waki
Toshiyuki Shiraki
Hideaki Konno
Kazuhiro Shibata
Masayoshi Itoh Katsunori Aizawa Takahiro Arakawa Yoshiyuki Ishii Daisuke Sasaki Hidemasa Bono Shinji Kondo Yuichi Sugahara Rintaro Saito Naoki Osato Shiro Fukuda Kenjiro Sato Akira Watahiki Tomoko Hirozane-Kishikawa Mari Nakamura Yuko Shibata Ayako Yasunishi Noriko Kikuchi Atsushi Yoshiki Moriaki Kusakabe Stefano Gustincich Kirk Beisel William Pavan Vassilis Aidinis Akira Nakagawara William A. Held Hiroo Iwata Tomohiro Kono Hiromitsu Nakauchi Paul Lyons Christine Wells David A. Hume Michela Fagiolini Takao K. Hensch Michelle Brinkmeier Sally Camper Junji Hirota Peter Mombaerts
... [+38 authors] ...,
Masami Muramatsu
Yasushi Okazaki
Jun Kawai
Yoshihide Hayashizaki

First Published June 2, 2003

COMMENTARY

A Guide to the Mammalian Genome

Yasushi Okazaki
David A. Hume

First Published June 2, 2003

LETTER

Phosphoregulators: Protein Kinases and Protein Phosphatases of Mouse

Alistair R.R. Forrest
Timothy Ravasi
Darrin Taylor
Thomas Huber
David A. Hume
Sean Grimmond

First Published June 2, 2003

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