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Method

DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly

  • Ilari Scheinin
  • Daoud Sie
  • Henrik Bengtsson
  • Mark A. van de Wiel
  • Adam B. Olshen
  • Hinke F. van Thuijl Hendrik F. van Essen Paul P. Eijk François Rustenburg Gerrit A. Meijer Jaap C. Reijneveld
  • ... [+6 authors] ...,
  • Pieter Wesseling
  • Daniel Pinkel
  • Donna G. Albertson
  • Bauke Ylstra
  • First Published September 18, 2014
Methods

Mapping segmental and sequence variations among laboratory mice using BAC array CGH

  • Antoine M. Snijders
  • Norma J. Nowak
  • Bing Huey
  • Jane Fridlyand
  • Sindy Law
  • Jeffrey Conroy Taku Tokuyasu Kubilay Demir Readman Chiu Jian-Hua Mao Ajay N. Jain
  • ... [+6 authors] ...,
  • Steven J.M. Jones
  • Allan Balmain
  • Daniel Pinkel
  • Donna G. Albertson
  • First Published February 1, 2005
LETTER

1274 Full-Open Reading Frames of Transcripts Expressed in the Developing Mouse Nervous System

  • Maria F. Bonaldo
  • Thomas B. Bair
  • Todd E. Scheetz
  • Einat Snir
  • Ike Akabogu
  • Jennifer L. Bair Brian Berger Keith Crouch Aja Davis Mari E. Eyestone Catherine Keppel Tamara A. Kucaba Mark Lebeck Jenny L. Lin Anna I.R. de Melo Joshua Rehmann Rebecca S. Reiter Kelly Schaefer Christina Smith Dylan Tack Kurtis Trout
  • ... [+16 authors] ...,
  • Val C. Sheffield
  • Jim J-C. Lin
  • Thomas L. Casavant
  • Marcelo B. Soares
  • First Published October 15, 2004
RESOURCE

High-Throughput Gene Discovery in the Rat

  • Todd E. Scheetz
  • Jennifer J. Laffin
  • Brian Berger
  • Sara Holte
  • Susan A. Baumes
  • Robert Brown Shereen Chang Justin Coco Jim Conklin Keith Crouch Micca Donohue Greg Doonan Chris Estes Mari Eyestone Katrina Fishler Jack Gardiner Lankai Guo Brad Johnson Catherine Keppel Rikki Kreger Mark Lebeck Rudy Marcelino Vladan Miljkovich Mindee Perdue Ling Qui Joshua Rehmann Rebecca S. Reiter Bridgette Rhoads Kelly Schaefer Christina Smith Ivana Sunjevaric Kurtis Trout Ning Wu Clayton L. Birkett Jared Bischof Barry Gackle Allen Gavin A. Jason Grundstad Brian Mokrzycki Chris Moressi Brian O'Leary Kevin Pedretti Chad Roberts Natalie L. Robinson Michael Smith Dylan Tack Nishank Trivedi Tamara Kucaba Tom Freeman Jim J.-C. Lin
  • ... [+45 authors] ...,
  • Maria F. Bonaldo
  • Thomas L. Casavant
  • Val C. Sheffield
  • M. Bento Soares
  • First Published April 1, 2004
RESOURCE

High-Density Rat Radiation Hybrid Maps Containing Over 24,000 SSLPs, Genes, and ESTs Provide a Direct Link to the Rat Genome Sequence

  • Anne E. Kwitek
  • Jo Gullings-Handley
  • Jiaming Yu
  • Danilo C. Carlos
  • Kimberly Orlebeke
  • Jeff Nie Jeffrey Eckert Angela Lemke Jaime Wendt Andrae Susan Bromberg Dean Pasko Dan Chen Todd E. Scheetz Thomas L. Casavant
  • ... [+9 authors] ...,
  • M. Bento Soares
  • Val C. Sheffield
  • Peter J. Tonellato
  • Howard J. Jacob
  • First Published April 1, 2004
ARTICLE

Large-Scale Variation Among Human and Great Ape Genomes Determined by Array Comparative Genomic Hybridization

  • Devin P. Locke
  • Richard Segraves
  • Lucia Carbone
  • Nicoletta Archidiacono
  • Donna G. Albertson
  • Daniel Pinkel
  • Evan E. Eichler
  • First Published March 1, 2003
METHODS

Whole Genome Analysis of Genetic Alterations in Small DNA Samples Using Hyperbranched Strand Displacement Amplification and Array–CGH

  • José M. Lage
  • John H. Leamon
  • Tanja Pejovic
  • Stefan Hamann
  • Michelle Lacey
  • Deborah Dillon Richard Segraves Bettina Vossbrinck Antonio González
  • ... [+4 authors] ...,
  • Daniel Pinkel
  • Donna G. Albertson
  • Jose Costa
  • Paul M. Lizardi
  • First Published February 1, 2003
METHODS

Fully Automatic Quantification of Microarray Image Data

  • Ajay N. Jain
  • Taku A. Tokuyasu
  • Antoine M. Snijders
  • Richard Segraves
  • Donna G. Albertson
  • Daniel Pinkel
  • First Published February 1, 2002
METHODS

Automated Construction of High-Density Comparative Maps Between Rat, Human, and Mouse

  • Anne E. Kwitek
  • Peter J. Tonellato
  • Dan Chen
  • Jo Gullings-Handley
  • Yongjian Samuel Cheng
  • Simon Twigger Todd E. Scheetz Thomas L. Casavant Monika Stoll Marcelo A. Nobrega
  • ... [+5 authors] ...,
  • Masahide Shiozawa
  • M. Bento Soares
  • Val C. Sheffield
  • Howard J. Jacob
  • First Published November 1, 2001
RESOURCE

Generation of a High-Density Rat EST Map

  • Todd E. Scheetz
  • Michael R. Raymond
  • Darryl Y. Nishimura
  • Ann McClain
  • Chad Roberts
  • Clay Birkett Jack Gardiner Jie Zhang Nichole Butters Christine Sun Anne Kwitek-Black
  • ... [+6 authors] ...,
  • Howard Jacob
  • Thomas L. Casavant
  • M. Bento Soares
  • Val C. Sheffield
  • First Published February 8, 2001
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