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Method

DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly

  • Ilari Scheinin
  • Daoud Sie
  • Henrik Bengtsson
  • Mark A. van de Wiel
  • Adam B. Olshen
  • Hinke F. van Thuijl Hendrik F. van Essen Paul P. Eijk François Rustenburg Gerrit A. Meijer Jaap C. Reijneveld
  • ... [+6 authors] ...,
  • Pieter Wesseling
  • Daniel Pinkel
  • Donna G. Albertson
  • Bauke Ylstra
  • First Published September 18, 2014
Research

A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen

  • Sung Ho Yoon
  • Serdar Turkarslan
  • David J. Reiss
  • Min Pan
  • June A. Burn
  • Kyle C. Costa Thomas J. Lie Joseph Slagel
  • ... [+3 authors] ...,
  • Robert L. Moritz
  • Murray Hackett
  • John A. Leigh
  • Nitin S. Baliga
  • First Published October 2, 2013
Resource

A miRNA-regulatory network explains how dysregulated miRNAs perturb oncogenic processes across diverse cancers

  • Christopher L. Plaisier
  • Min Pan
  • Nitin S. Baliga
  • First Published June 28, 2012
Research

Parallel evolution of transcriptome architecture during genome reorganization

  • Sung Ho Yoon
  • David J. Reiss
  • J. Christopher Bare
  • Dan Tenenbaum
  • Min Pan
  • Joseph Slagel Robert L. Moritz Sujung Lim Murray Hackett Angeli Lal Menon Michael W.W. Adams
  • ... [+6 authors] ...,
  • Adam Barnebey
  • Steven M. Yannone
  • John A. Leigh
  • Nitin S. Baliga
  • First Published July 12, 2011
ARTICLE

The anatomy of microbial cell state transitions in response to oxygen

  • Amy K. Schmid
  • David J. Reiss
  • Amardeep Kaur
  • Min Pan
  • Nichole King
  • Phu T. Van
  • Laura Hohmann
  • Daniel B. Martin
  • Nitin S. Baliga
  • First Published September 4, 2007
ARTICLE

A systems view of haloarchaeal strategies to withstand stress from transition metals

  • Amardeep Kaur
  • Min Pan
  • Megan Meislin
  • Marc T. Facciotti
  • Raafat El-Gewely
  • Nitin S. Baliga
  • First Published June 2, 2006
Methods

Mapping segmental and sequence variations among laboratory mice using BAC array CGH

  • Antoine M. Snijders
  • Norma J. Nowak
  • Bing Huey
  • Jane Fridlyand
  • Sindy Law
  • Jeffrey Conroy Taku Tokuyasu Kubilay Demir Readman Chiu Jian-Hua Mao Ajay N. Jain
  • ... [+6 authors] ...,
  • Steven J.M. Jones
  • Allan Balmain
  • Daniel Pinkel
  • Donna G. Albertson
  • First Published February 1, 2005
ARTICLE

Haloarcula marismortui: A halophilic archaeon from the Dead Sea" > Genome sequence of Haloarcula marismortui: A halophilic archaeon from the Dead Sea

  • Nitin S. Baliga
  • Richard Bonneau
  • Marc T. Facciotti
  • Min Pan
  • Gustavo Glusman
  • Eric W. Deutsch Paul Shannon Yulun Chiu Rueyhung Sting Weng Rueichi Richie Gan Pingliang Hung
  • ... [+6 authors] ...,
  • Shailesh V. Date
  • Edward Marcotte
  • Leroy Hood
  • Wailap Victor Ng
  • First Published November 1, 2004
LETTER

Halobacterium NRC-1" > Systems Level Insights Into the Stress Response to UV Radiation in the Halophilic Archaeon Halobacterium NRC-1

  • Nitin S. Baliga
  • Sarah J. Bjork
  • Richard Bonneau
  • Min Pan
  • Chika Iloanusi
  • Molly C.H. Kottemann
  • Leroy Hood
  • Jocelyne DiRuggiero
  • First Published May 12, 2004
ARTICLE

Large-Scale Variation Among Human and Great Ape Genomes Determined by Array Comparative Genomic Hybridization

  • Devin P. Locke
  • Richard Segraves
  • Lucia Carbone
  • Nicoletta Archidiacono
  • Donna G. Albertson
  • Daniel Pinkel
  • Evan E. Eichler
  • First Published March 1, 2003
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