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Method

Genealogical inference and more flexible sequence clustering using iterative-PopPUNK

  • First Published May 30, 2023
Method

Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses

  • First Published February 14, 2020
Method

Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation

  • First Published February 2, 2015
Method

Mapping functional transcription factor networks from gene expression data

  • First Published May 1, 2013
Resource

Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines

  • First Published December 22, 2010
Methods

Inferring genomic flux in bacteria

  • First Published November 17, 2008
Methods

Targeted discovery of novel human exons by comparative genomics

  • First Published November 7, 2007
Methods

A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices

  • First Published January 8, 2007
RESOURCE

Iterative gene prediction and pseudogene removal improves genome annotation

  • First Published May 1, 2006
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