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Method

Genealogical inference and more flexible sequence clustering using iterative-PopPUNK

  • Bin Zhao
  • John A. Lees
  • Hongjin Wu
  • Chao Yang
  • Daniel Falush
  • First Published May 30, 2023
Methods

Sensitive and accurate detection of copy number variants using read depth of coverage

  • Seungtai Yoon
  • Zhenyu Xuan
  • Vladimir Makarov
  • Kenny Ye
  • Jonathan Sebat
  • First Published August 5, 2009
Methods

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

  • Emily Hodges
  • Andrew D. Smith
  • Jude Kendall
  • Zhenyu Xuan
  • Kandasamy Ravi
  • Michelle Rooks Michael Q. Zhang Kenny Ye Arindam Bhattacharjee Leonardo Brizuela
  • ... [+5 authors] ...,
  • W. Richard McCombie
  • Michael Wigler
  • Gregory J. Hannon
  • James B. Hicks
  • First Published July 6, 2009
Methods

Inferring genomic flux in bacteria

  • Xavier Didelot
  • Aaron Darling
  • Daniel Falush
  • First Published November 17, 2008
LETTER

Novel patterns of genome rearrangement and their association with survival in breast cancer

  • James Hicks
  • Alexander Krasnitz
  • B. Lakshmi
  • Nicholas E. Navin
  • Michael Riggs
  • Evan Leibu Diane Esposito Joan Alexander Jen Troge Vladimir Grubor Seungtai Yoon Michael Wigler Kenny Ye Anne-Lise Børresen-Dale Bjørn Naume Ellen Schlicting Larry Norton Torsten Hägerström Lambert Skoog
  • ... [+14 authors] ...,
  • Gert Auer
  • Susanne Månér
  • Pär Lundin
  • Anders Zetterberg
  • First Published December 1, 2006
LETTER

Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?" > A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?

  • Xavier Didelot
  • Mark Achtman
  • Julian Parkhill
  • Nicholas R. Thomson
  • Daniel Falush
  • First Published November 7, 2006
Methods

Comparative isoschizomer profiling of cytosine methylation: The HELP assay

  • Batbayar Khulan
  • Reid F. Thompson
  • Kenny Ye
  • Melissa J. Fazzari
  • Masako Suzuki
  • Edyta Stasiek Maria E. Figueroa Jacob L. Glass Quan Chen Cristina Montagna Eli Hatchwell Rebecca R. Selzer
  • ... [+7 authors] ...,
  • Todd A. Richmond
  • Roland D. Green
  • Ari Melnick
  • John M. Greally
  • First Published June 29, 2006
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