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Method

Genealogical inference and more flexible sequence clustering using iterative-PopPUNK

  • Bin Zhao
  • John A. Lees
  • Hongjin Wu
  • Chao Yang
  • Daniel Falush
  • First Published May 30, 2023
Methods

Inferring genomic flux in bacteria

  • Xavier Didelot
  • Aaron Darling
  • Daniel Falush
  • First Published November 17, 2008
LETTER

Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?" > A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?

  • Xavier Didelot
  • Mark Achtman
  • Julian Parkhill
  • Nicholas R. Thomson
  • Daniel Falush
  • First Published November 7, 2006
ARTICLE

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

  • Timothy Ravasi
  • Harukazu Suzuki
  • Ken C. Pang
  • Shintaro Katayama
  • Masaaki Furuno
  • Rie Okunishi Shiro Fukuda Kelin Ru Martin C. Frith M. Milena Gongora
  • ... [+5 authors] ...,
  • Sean M. Grimmond
  • David A. Hume
  • Yoshihide Hayashizaki
  • John S. Mattick
  • First Published December 12, 2005
ARTICLE

Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia

  • Piero Carninci
  • Kazunori Waki
  • Toshiyuki Shiraki
  • Hideaki Konno
  • Kazuhiro Shibata
  • Masayoshi Itoh Katsunori Aizawa Takahiro Arakawa Yoshiyuki Ishii Daisuke Sasaki Hidemasa Bono Shinji Kondo Yuichi Sugahara Rintaro Saito Naoki Osato Shiro Fukuda Kenjiro Sato Akira Watahiki Tomoko Hirozane-Kishikawa Mari Nakamura Yuko Shibata Ayako Yasunishi Noriko Kikuchi Atsushi Yoshiki Moriaki Kusakabe Stefano Gustincich Kirk Beisel William Pavan Vassilis Aidinis Akira Nakagawara William A. Held Hiroo Iwata Tomohiro Kono Hiromitsu Nakauchi Paul Lyons Christine Wells David A. Hume Michela Fagiolini Takao K. Hensch Michelle Brinkmeier Sally Camper Junji Hirota Peter Mombaerts
  • ... [+38 authors] ...,
  • Masami Muramatsu
  • Yasushi Okazaki
  • Jun Kawai
  • Yoshihide Hayashizaki
  • First Published June 2, 2003
COMMENTARY

A Guide to the Mammalian Genome

  • Yasushi Okazaki
  • David A. Hume
  • First Published June 2, 2003
LETTER

Phosphoregulators: Protein Kinases and Protein Phosphatases of Mouse

  • Alistair R.R. Forrest
  • Timothy Ravasi
  • Darrin Taylor
  • Thomas Huber
  • David A. Hume
  • Sean Grimmond
  • First Published June 2, 2003
LETTER

Systematic Expression Profiling of the Mouse Transcriptome Using RIKEN cDNA Microarrays

  • Hidemasa Bono
  • Ken Yagi
  • Takeya Kasukawa
  • Itoshi Nikaido
  • Naoko Tominaga
  • Rika Miki Yosuke Mizuno Yasuhiro Tomaru Hitoshi Goto Hiroyuki Nitanda Daisuke Shimizu Hirochika Makino Tomoyuki Morita Junshin Fujiyama Takehito Sakai
  • ... [+10 authors] ...,
  • Takashi Shimoji
  • David A. Hume
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • First Published June 2, 2003
LETTER

The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment

  • Sean M. Grimmond
  • Kevin C. Miranda
  • Zheng Yuan
  • Melissa J. Davis
  • David A. Hume
  • Ken Yagi Naoko Tominaga
  • ... [+2 authors] ...,
  • Hidemasa Bono
  • Yoshihide Hayashizaki
  • Yasushi Okazaki
  • Rohan D. Teasdale
  • First Published June 2, 2003
LETTER

Systematic Characterization of the Zinc-Finger-Containing Proteins in the Mouse Transcriptome

  • Timothy Ravasi
  • Thomas Huber
  • Mihaela Zavolan
  • Alistair Forrest
  • Terry Gaasterland
  • Sean Grimmond
  • David A. Hume
  • First Published June 2, 2003
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