Analyzing rare mutations in metagenomes assembled using long and accurate reads
- First Published November 23, 2022
Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
- First Published November 15, 2022
V(DD)J recombination is an important and evolutionarily conserved mechanism for generating antibodies with unusually long CDR3s
- First Published September 18, 2020
BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs
- First Published June 3, 2019
Detection and analysis of ancient segmental duplications in mammalian genomes
- First Published May 7, 2018
Corrigendum: Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells
- First Published September 1, 2015
Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells
- First Published March 19, 2015
RBFOX and PTBP1 proteins regulate the alternative splicing of micro-exons in human brain transcripts
- First Published December 18, 2014
Violation of the 12/23 rule of genomic V(D)J recombination is common in lymphocytes
- First Published November 3, 2014
Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia" > Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia
- First Published September 15, 2014
Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA
- First Published November 16, 2011
Natural genetic variation caused by small insertions and deletions in the human genome
- First Published April 1, 2011
A ChIP-seq defined genome-wide map of vitamin D receptor binding: Associations with disease and evolution
- First Published August 24, 2010
Massive turnover of functional sequence in human and other mammalian genomes
- First Published August 6, 2010
Genome assembly quality: Assessment and improvement using the neutral indel model
- First Published March 19, 2010
De novo fragment assembly with short mate-paired reads: Does the read length matter?
- First Published December 3, 2008
Reduced purifying selection prevails over positive selection in human copy number variant evolution
- First Published August 7, 2008
Defensins and the convergent evolution of platypus and reptile venom genes
- First Published May 7, 2008
Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes
- First Published April 21, 2008
Drosophila genomes" > Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes
- First Published November 7, 2007
Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation
- First Published August 9, 2007
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
- First Published March 26, 2007
The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction
- First Published March 1, 2006
Evolution and Comparative Genomics of Odorant- and Pheromone-Associated Genes in Rodents
- First Published April 1, 2004
Occurrence and Consequences of Coding Sequence Insertions and Deletions in Mammalian Genomes
- First Published April 1, 2004
Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes
- First Published April 1, 2004
Elevated Rates of Protein Secretion, Evolution, and Disease Among Tissue-Specific Genes
- First Published January 5, 2004
Predicting Protein Cellular Localization Using a Domain Projection Method
- First Published August 1, 2002
Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species
- First Published January 1, 2002
Systematic Identification of Novel Protein Domain Families Associated with Nuclear Functions
- First Published January 1, 2002
Efficiency of Database Search for Identification of Mutated and Modified Proteins via Mass Spectrometry
- First Published February 1, 2001