Research
Integrating short-read and long-read single-cell RNA sequencing for comprehensive transcriptome profiling in mouse retina
- First Published March 6, 2025
Method
Predicting unrecognized enhancer-mediated genome topology by an ensemble machine learning model
- First Published November 12, 2020
Resource
Assembly and analysis of 100 full MHC haplotypes from the Danish population
- First Published August 3, 2017
Research
SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes
- First Published November 13, 2015
Corrigendum
Corrigendum: Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells
- First Published September 1, 2015
Research
Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells
- First Published March 19, 2015
Research
RBFOX and PTBP1 proteins regulate the alternative splicing of micro-exons in human brain transcripts
- First Published December 18, 2014
Research
Violation of the 12/23 rule of genomic V(D)J recombination is common in lymphocytes
- First Published November 3, 2014
Research
Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia
- First Published September 15, 2014
Research
Epigenetic modification and inheritance in sexual reversal of fish
- First Published February 2, 2014
Resource
SOAPindel: Efficient identification of indels from short paired reads
- First Published September 12, 2012
Method
Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA
- First Published November 16, 2011
Research
Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome
- First Published October 17, 2011
Research
The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species
- First Published October 12, 2011
Research
The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming
- First Published June 30, 2011
Research
Natural genetic variation caused by small insertions and deletions in the human genome
- First Published April 1, 2011
Research
A ChIP-seq defined genome-wide map of vitamin D receptor binding: Associations with disease and evolution
- First Published August 24, 2010
Research
Massive turnover of functional sequence in human and other mammalian genomes
- First Published August 6, 2010
Method
Genome assembly quality: Assessment and improvement using the neutral indel model
- First Published March 19, 2010
Research
Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome
- First Published March 19, 2010
Resource
De novo assembly of human genomes with massively parallel short read sequencing
- First Published December 17, 2009
LETTER
Reduced purifying selection prevails over positive selection in human copy number variant evolution
- First Published August 7, 2008
Platypus Special/Letter
Defensins and the convergent evolution of platypus and reptile venom genes
- First Published May 7, 2008
12 | Genomes/Letter
Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes
- First Published November 7, 2007
LETTER
An analysis of the gene complement of a marsupial, Monodelphis domestica: Evolution of lineage-specific genes and giant chromosomes
- First Published May 10, 2007
ARTICLE
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
- First Published March 26, 2007
Dog Special/Letters
Hotspots of mutation and breakage in dog and human chromosomes
- First Published December 8, 2005
LETTER
A microarray analysis of the rice transcriptome and its comparison to Arabidopsis
- First Published September 1, 2005
LETTER
Comparative Evolutionary Genomics of Androgen-Binding Protein Genes
- First Published July 15, 2004
LETTER
Evolution and Comparative Genomics of Odorant- and Pheromone-Associated Genes in Rodents
- First Published April 1, 2004
LETTER
Occurrence and Consequences of Coding Sequence Insertions and Deletions in Mammalian Genomes
- First Published April 1, 2004
LETTER
Elevated Rates of Protein Secretion, Evolution, and Disease Among Tissue-Specific Genes
- First Published January 5, 2004
LETTER
Predicting Protein Cellular Localization Using a Domain Projection Method
- First Published August 1, 2002
METHODS
RePS: A Sequence Assembler That Masks Exact Repeats Identified from the Shotgun Data
- First Published May 1, 2002
LETTER
Systematic Identification of Novel Protein Domain Families Associated with Nuclear Functions
- First Published January 1, 2002
ARTICLE
Novel Protein Domains and Repeats in Drosophila melanogaster: Insights into Structure, Function, and Evolution
- First Published November 12, 2001