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Research

Epigenetic characterization of pseudogenes across human tissues

  • Yunzhe Jiang
  • Beatrice Borsari
  • Mark Gerstein
  • First Published April 15, 2026
Corrigendum

Corrigendum: TP53-inducible putative long noncoding RNAs encode functional polypeptides that suppress cell proliferation

  • Wenli Xu
  • Chang Liu
  • Bing Deng
  • Penghui Lin
  • Zhenghua Sun
  • Anrui Liu Jiajia Xuan Yuying Li Keren Zhou Xiaoqin Zhang Qiaojuan Huang Hui Zhou
  • ... [+7 authors] ...,
  • Qingyu He
  • Bin Li
  • Lianghu Qu
  • Jianhua Yang
  • First Published April 7, 2026
Resource

Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships" > Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships

  • Michelle Kudron
  • Louis Gevirtzman
  • Alec Victorsen
  • Bridget C. Lear
  • Jiahao Gao
  • Jinrui Xu Swapna Samanta Emily Frink Adri Tran-Pearson Chau Huynh Dionne Vafeados Ann Hammonds William Fisher Martha Wall Greg Wesseling Vanessa Hernandez Zhichun Lin Mary Kasparian Kevin White Ravi Allada Mark Gerstein
  • ... [+16 authors] ...,
  • LaDeana Hillier
  • Susan E. Celniker
  • Valerie Reinke
  • Robert H. Waterston
  • First Published October 22, 2024
Research

TP53-inducible putative long noncoding RNAs encode functional polypeptides that suppress cell proliferation

  • Wenli Xu
  • Chang Liu
  • Bing Deng
  • Penghui Lin
  • Zhenghua Sun
  • Anrui Liu Jiajia Xuan Yuying Li Keren Zhou Xiaoqin Zhang Qiaojuan Huang Hui Zhou
  • ... [+7 authors] ...,
  • Qingyu He
  • Bin Li
  • Lianghu Qu
  • Jianhua Yang
  • First Published May 24, 2022
Research

Mus caroli and Mus pahari genomes" > Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

  • David Thybert
  • Maša Roller
  • Fábio C.P. Navarro
  • Ian Fiddes
  • Ian Streeter
  • Christine Feig David Martin-Galvez Mikhail Kolmogorov Václav Janoušek Wasiu Akanni Bronwen Aken Sarah Aldridge Varshith Chakrapani William Chow Laura Clarke Carla Cummins Anthony Doran Matthew Dunn Leo Goodstadt Kerstin Howe Matthew Howell Ambre-Aurore Josselin Robert C. Karn Christina M. Laukaitis Lilue Jingtao Fergal Martin Matthieu Muffato Stefanie Nachtweide Michael A. Quail Cristina Sisu Mario Stanke Klara Stefflova Cock Van Oosterhout Frederic Veyrunes Ben Ward Fengtang Yang Golbahar Yazdanifar Amonida Zadissa David J. Adams Alvis Brazma Mark Gerstein Benedict Paten
  • ... [+37 authors] ...,
  • Son Pham
  • Thomas M. Keane
  • Duncan T. Odom
  • Paul Flicek
  • First Published March 21, 2018
Research

Arabidopsis genome at the nuclear periphery" > Nonrandom domain organization of the Arabidopsis genome at the nuclear periphery

  • Xiuli Bi
  • Ying-Juan Cheng
  • Bo Hu
  • Xiaoli Ma
  • Rui Wu
  • Jia-Wei Wang
  • Chang Liu
  • First Published April 6, 2017
Research

Arabidopsis thaliana at single-gene resolution" > Genome-wide analysis of chromatin packing in Arabidopsis thaliana at single-gene resolution

  • Chang Liu
  • Congmao Wang
  • George Wang
  • Claude Becker
  • Maricris Zaidem
  • Detlef Weigel
  • First Published May 25, 2016
Research

Arabidopsis thaliana" > Genome-wide analysis of local chromatin packing in Arabidopsis thaliana

  • Congmao Wang
  • Chang Liu
  • Damian Roqueiro
  • Dominik Grimm
  • Rebecca Schwab
  • Claude Becker
  • Christa Lanz
  • Detlef Weigel
  • First Published November 3, 2014
Research

Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division

  • Alexej Abyzov
  • Rebecca Iskow
  • Omer Gokcumen
  • David W. Radke
  • Suganthi Balasubramanian
  • Baikang Pei
  • Lukas Habegger
  • Charles Lee
  • Mark Gerstein
  • First Published September 11, 2013
Research

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

  • Stephen B. Montgomery
  • David L. Goode
  • Erika Kvikstad
  • Cornelis A. Albers
  • Zhengdong D. Zhang
  • Xinmeng Jasmine Mu Guruprasad Ananda Bryan Howie Konrad J. Karczewski Kevin S. Smith Vanessa Anaya Rhea Richardson Joe Davis Daniel G. MacArthur Arend Sidow Laurent Duret Mark Gerstein
  • ... [+12 authors] ...,
  • Kateryna D. Makova
  • Jonathan Marchini
  • Gil McVean
  • Gerton Lunter
  • First Published March 11, 2013
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