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Your search for returned 17 results

Method

SvABA: genome-wide detection of structural variants and indels by local assembly

Jeremiah A. Wala
Pratiti Bandopadhayay
Noah F. Greenwald
Ryan O'Rourke
Ted Sharpe
Chip Stewart Steve Schumacher Yilong Li Joachim Weischenfeldt Xiaotong Yao Chad Nusbaum Peter Campbell Gad Getz
... [+8 authors] ...,
Matthew Meyerson
Cheng-Zhong Zhang
Marcin Imielinski
Rameen Beroukhim

First Published March 13, 2018

Research

A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen

Sung Ho Yoon
Serdar Turkarslan
David J. Reiss
Min Pan
June A. Burn
Kyle C. Costa Thomas J. Lie Joseph Slagel
... [+3 authors] ...,
Robert L. Moritz
Murray Hackett
John A. Leigh
Nitin S. Baliga

First Published October 2, 2013

Method

Finished bacterial genomes from shotgun sequence data

Filipe J. Ribeiro
Dariusz Przybylski
Shuangye Yin
Ted Sharpe
Sante Gnerre
Amr Abouelleil Aaron M. Berlin Anna Montmayeur Terrance P. Shea Bruce J. Walker Sarah K. Young
... [+6 authors] ...,
Carsten Russ
Chad Nusbaum
Iain MacCallum
David B. Jaffe

First Published July 24, 2012

Method

Paired-end sequencing of Fosmid libraries by Illumina

Louise J.S. Williams
Diana G. Tabbaa
Na Li
Aaron M. Berlin
Terrance P. Shea
Iain MacCallum Michael S. Lawrence Yotam Drier Gad Getz
... [+4 authors] ...,
Sarah K. Young
David B. Jaffe
Chad Nusbaum
Andreas Gnirke

First Published July 16, 2012

Resource

A miRNA-regulatory network explains how dysregulated miRNAs perturb oncogenic processes across diverse cancers

Christopher L. Plaisier
Min Pan
Nitin S. Baliga

First Published June 28, 2012

Research

Parallel evolution of transcriptome architecture during genome reorganization

Sung Ho Yoon
David J. Reiss
J. Christopher Bare
Dan Tenenbaum
Min Pan
Joseph Slagel Robert L. Moritz Sujung Lim Murray Hackett Angeli Lal Menon Michael W.W. Adams
... [+6 authors] ...,
Adam Barnebey
Steven M. Yannone
John A. Leigh
Nitin S. Baliga

First Published July 12, 2011

Research

Integrative analysis of the melanoma transcriptome

Michael F. Berger
Joshua Z. Levin
Krishna Vijayendran
Andrey Sivachenko
Xian Adiconis
Jared Maguire Laura A. Johnson James Robinson Roel G. Verhaak Carrie Sougnez Robert C. Onofrio Liuda Ziaugra Kristian Cibulskis Elisabeth Laine Jordi Barretina Wendy Winckler David E. Fisher Gad Getz Matthew Meyerson David B. Jaffe Stacey B. Gabriel Eric S. Lander
... [+17 authors] ...,
Reinhard Dummer
Andreas Gnirke
Chad Nusbaum
Levi A. Garraway

First Published February 23, 2010

RESOURCE

ALLPATHS: De novo assembly of whole-genome shotgun microreads

Jonathan Butler
Iain MacCallum
Michael Kleber
Ilya A. Shlyakhter
Matthew K. Belmonte
Eric S. Lander
Chad Nusbaum
David B. Jaffe

First Published March 13, 2008

Methods

Quality scores and SNP detection in sequencing-by-synthesis systems

William Brockman
Pablo Alvarez
Sarah Young
Manuel Garber
Georgia Giannoukos
William L. Lee
... [+1 authors] ...,
Carsten Russ
Eric S. Lander
Chad Nusbaum
David B. Jaffe

First Published January 22, 2008

ARTICLE

The anatomy of microbial cell state transitions in response to oxygen

Amy K. Schmid
David J. Reiss
Amardeep Kaur
Min Pan
Nichole King
Phu T. Van
Laura Hohmann
Daniel B. Martin
Nitin S. Baliga

First Published September 4, 2007

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