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RESOURCE

ALLPATHS: De novo assembly of whole-genome shotgun microreads

  • Jonathan Butler
  • Iain MacCallum
  • Michael Kleber
  • Ilya A. Shlyakhter
  • Matthew K. Belmonte
  • Eric S. Lander
  • Chad Nusbaum
  • David B. Jaffe
  • First Published March 13, 2008
Methods

SyMAP: A system for discovering and viewing syntenic regions of FPC maps

  • Carol Soderlund
  • William Nelson
  • Austin Shoemaker
  • Andrew Paterson
  • First Published September 1, 2006
RESOURCE

Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza" > The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza

  • Jetty S.S. Ammiraju
  • Meizhong Luo
  • José L. Goicoechea
  • Wenming Wang
  • Dave Kudrna
  • Christopher Mueller Jayson Talag HyeRan Kim Nicholas B. Sisneros Barbara Blackmon Eric Fang Jeffery B. Tomkins Darshan Brar David MacKill Susan McCouch Nori Kurata Georgina Lambert David W. Galbraith K. Arumuganathan Kiran Rao Jason G. Walling Navdeep Gill Yeisoo Yu
  • ... [+18 authors] ...,
  • Phillip SanMiguel
  • Carol Soderlund
  • Scott Jackson
  • Rod A. Wing
  • First Published December 12, 2005
ARTICLE

Mycoplasma mobile" > The Complete Genome and Proteome of Mycoplasma mobile

  • Jacob D. Jaffe
  • Nicole Stange-Thomann
  • Cherylyn Smith
  • David DeCaprio
  • Sheila Fisher
  • Jonathan Butler Sarah Calvo Tim Elkins Michael G. FitzGerald Nabil Hafez Chinnappa D. Kodira John Major Shunguang Wang Jane Wilkinson Robert Nicol
  • ... [+10 authors] ...,
  • Chad Nusbaum
  • Bruce Birren
  • Howard C. Berg
  • George M. Church
  • First Published August 2, 2004
METHODS

Whole-Genome Sequence Assembly for Mammalian Genomes: Arachne 2

  • David B. Jaffe
  • Jonathan Butler
  • Sante Gnerre
  • Evan Mauceli
  • Kerstin Lindblad-Toh
  • Jill P. Mesirov
  • Michael C. Zody
  • Eric S. Lander
  • First Published January 1, 2003
METHODS

ARACHNE: A Whole-Genome Shotgun Assembler

  • Serafim Batzoglou
  • David B. Jaffe
  • Ken Stanley
  • Jonathan Butler
  • Sante Gnerre
  • Evan Mauceli
  • Bonnie Berger
  • Jill P. Mesirov
  • Eric S. Lander
  • First Published January 1, 2002
METHODS

Contigs Built with Fingerprints, Markers, and FPC V4.7

  • Carol Soderlund
  • Sean Humphray
  • Andrew Dunham
  • Lisa French
  • First Published November 8, 2000
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