Search | Genome Research

Your search for returned 14 results

Method

SvABA: genome-wide detection of structural variants and indels by local assembly

Jeremiah A. Wala
Pratiti Bandopadhayay
Noah F. Greenwald
Ryan O'Rourke
Ted Sharpe
Chip Stewart Steve Schumacher Yilong Li Joachim Weischenfeldt Xiaotong Yao Chad Nusbaum Peter Campbell Gad Getz
... [+8 authors] ...,
Matthew Meyerson
Cheng-Zhong Zhang
Marcin Imielinski
Rameen Beroukhim

First Published March 13, 2018

Method

Finished bacterial genomes from shotgun sequence data

Filipe J. Ribeiro
Dariusz Przybylski
Shuangye Yin
Ted Sharpe
Sante Gnerre
Amr Abouelleil Aaron M. Berlin Anna Montmayeur Terrance P. Shea Bruce J. Walker Sarah K. Young
... [+6 authors] ...,
Carsten Russ
Chad Nusbaum
Iain MacCallum
David B. Jaffe

First Published July 24, 2012

Method

Paired-end sequencing of Fosmid libraries by Illumina

Louise J.S. Williams
Diana G. Tabbaa
Na Li
Aaron M. Berlin
Terrance P. Shea
Iain MacCallum Michael S. Lawrence Yotam Drier Gad Getz
... [+4 authors] ...,
Sarah K. Young
David B. Jaffe
Chad Nusbaum
Andreas Gnirke

First Published July 16, 2012

Research

Integrative analysis of the melanoma transcriptome

Michael F. Berger
Joshua Z. Levin
Krishna Vijayendran
Andrey Sivachenko
Xian Adiconis
Jared Maguire Laura A. Johnson James Robinson Roel G. Verhaak Carrie Sougnez Robert C. Onofrio Liuda Ziaugra Kristian Cibulskis Elisabeth Laine Jordi Barretina Wendy Winckler David E. Fisher Gad Getz Matthew Meyerson David B. Jaffe Stacey B. Gabriel Eric S. Lander
... [+17 authors] ...,
Reinhard Dummer
Andreas Gnirke
Chad Nusbaum
Levi A. Garraway

First Published February 23, 2010

RESOURCE

ALLPATHS: De novo assembly of whole-genome shotgun microreads

Jonathan Butler
Iain MacCallum
Michael Kleber
Ilya A. Shlyakhter
Matthew K. Belmonte
Eric S. Lander
Chad Nusbaum
David B. Jaffe

First Published March 13, 2008

Methods

Quality scores and SNP detection in sequencing-by-synthesis systems

William Brockman
Pablo Alvarez
Sarah Young
Manuel Garber
Georgia Giannoukos
William L. Lee
... [+1 authors] ...,
Carsten Russ
Eric S. Lander
Chad Nusbaum
David B. Jaffe

First Published January 22, 2008

Methods

Chromosome Conformation Capture Carbon Copy (5C): A massively parallel solution for mapping interactions between genomic elements

Josée Dostie
Todd A. Richmond
Ramy A. Arnaout
Rebecca R. Selzer
William L. Lee
Tracey A. Honan Eric D. Rubio Anton Krumm
... [+3 authors] ...,
Justin Lamb
Chad Nusbaum
Roland D. Green
Job Dekker

First Published September 5, 2006

Methods

SyMAP: A system for discovering and viewing syntenic regions of FPC maps

Carol Soderlund
William Nelson
Austin Shoemaker
Andrew Paterson

First Published September 1, 2006

LETTER

Uneven chromosome contraction and expansion in the maize genome

Rémy Bruggmann
Arvind K. Bharti
Heidrun Gundlach
Jinsheng Lai
Sarah Young
Ana C. Pontaroli Fusheng Wei Georg Haberer Galina Fuks Chunguang Du Christina Raymond Matt C. Estep Renyi Liu Jeffrey L. Bennetzen Agnes P. Chan Pablo D. Rabinowicz John Quackenbush W. Brad Barbazuk Rod A. Wing Bruce Birren
... [+15 authors] ...,
Chad Nusbaum
Steve Rounsley
Klaus F.X. Mayer
Joachim Messing

First Published August 10, 2006

RESOURCE

Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza" > The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza

Jetty S.S. Ammiraju
Meizhong Luo
José L. Goicoechea
Wenming Wang
Dave Kudrna
Christopher Mueller Jayson Talag HyeRan Kim Nicholas B. Sisneros Barbara Blackmon Eric Fang Jeffery B. Tomkins Darshan Brar David MacKill Susan McCouch Nori Kurata Georgina Lambert David W. Galbraith K. Arumuganathan Kiran Rao Jason G. Walling Navdeep Gill Yeisoo Yu
... [+18 authors] ...,
Phillip SanMiguel
Carol Soderlund
Scott Jackson
Rod A. Wing

First Published December 12, 2005

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