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Research

Alu insertion variants alter gene transcript levels" > Alu insertion variants alter gene transcript levels

Lindsay M. Payer
Jared P. Steranka
Maria S. Kryatova
Giacomo Grillo
Mathieu Lupien
Pedro P. Rocha
Kathleen H. Burns

First Published November 19, 2021

Method

Targeted single-cell RNA sequencing of transcription factors enhances the identification of cell types and trajectories

Alexandra Pokhilko
Adam E. Handel
Fabiola Curion
Viola Volpato
Emma S. Whiteley
Sunniva Bøstrand Sarah E. Newey Colin J. Akerman
... [+3 authors] ...,
Caleb Webber
Michael B. Clark
Rory Bowden
M. Zameel Cader

First Published May 19, 2021

Method

cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks" > Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks

Seyed Ali Madani Tonekaboni
Parisa Mazrooei
Victor Kofia
Benjamin Haibe-Kains
Mathieu Lupien

First Published September 18, 2019

Research

High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma

Michael J. Johnston
Ana Nikolic
Nicoletta Ninkovic
Paul Guilhamon
Florence M.G. Cavalli
Steven Seaman Franz J. Zemp John Lee Aly Abdelkareem Katrina Ellestad Alex Murison Michelle M. Kushida Fiona J. Coutinho Yussanne Ma Andrew J. Mungall Richard Moore Marco A. Marra Michael D. Taylor Peter B. Dirks Trevor J. Pugh Sorana Morrissy
... [+16 authors] ...,
Bradley St Croix
Douglas J. Mahoney
Mathieu Lupien
Marco Gallo

First Published June 27, 2019

Research

cis-regulatory modules controlling liver functions" > The logic of transcriptional regulator recruitment architecture at cis-regulatory modules controlling liver functions

Julie Dubois-Chevalier
Vanessa Dubois
Hélène Dehondt
Parisa Mazrooei
Claire Mazuy
Aurélien A. Sérandour Céline Gheeraert Penderia Guillaume Eric Baugé Bruno Derudas Nathalie Hennuyer Réjane Paumelle Guillemette Marot Jason S. Carroll
... [+9 authors] ...,
Mathieu Lupien
Bart Staels
Philippe Lefebvre
Jérôme Eeckhoute

First Published April 11, 2017

Corrigendum

Corrigendum: Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

Jennifer Y. Tan
Tamara Sirey
Frantisek Honti
Bryony Graham
Allison Piovesan
Matthias Merkenschlager
Caleb Webber
Chris P. Ponting
Ana C. Marques

First Published September 1, 2015

Research

The clustering of functionally related genes contributes to CNV-mediated disease

Tallulah Andrews
Frantisek Honti
Rolph Pfundt
Nicole de Leeuw
Jayne Hehir-Kwa
Anneke Vulto-van Silfhout
Bert de Vries
Caleb Webber

First Published April 17, 2015

Research

Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

Jennifer Y. Tan
Tamara Sirey
Frantisek Honti
Bryony Graham
Allison Piovesan
Matthias Merkenschlager
Caleb Webber
Chris P. Ponting
Ana C. Marques

First Published March 19, 2015

Research

Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits

Olivia Corradin
Alina Saiakhova
Batool Akhtar-Zaidi
Lois Myeroff
Joseph Willis
Richard Cowper-Sal·lari
Mathieu Lupien
Sanford Markowitz
Peter C. Scacheri

First Published November 6, 2013

Research

SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus" > Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus

Xiaoyang Zhang
Richard Cowper-Sal·lari
Swneke D. Bailey
Jason H. Moore
Mathieu Lupien

First Published June 4, 2012

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