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Method

Highly accurate assembly polishing with DeepPolisher

  • First Published May 19, 2025
Method

Verkko2 integrates proximity-ligation data with long-read De Bruijn graphs for efficient telomere-to-telomere genome assembly, phasing, and scaffolding

  • First Published May 19, 2025
Resource

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

  • First Published July 1, 2024
Method

Domain-adaptive neural networks improve cross-species prediction of transcription factor binding

  • First Published January 18, 2022
Method

Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA

  • First Published June 17, 2021
Method

HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads

  • First Published August 14, 2020
Resource

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

  • First Published March 4, 2020
Method

HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient

  • First Published August 30, 2017
Method

k-mer weighting and repeat separation" > Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

  • First Published March 15, 2017
Research

Genome accessibility is widely preserved and locally modulated during mitosis

  • First Published November 4, 2014
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