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Resource

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

  • Mats E. Pettersson
  • Christina M. Rochus
  • Fan Han
  • Junfeng Chen
  • Jason Hill
  • Ola Wallerman Guangyi Fan Xiaoning Hong Qiwu Xu He Zhang Shanshan Liu Xin Liu Leanne Haggerty Toby Hunt Fergal J. Martin
  • ... [+10 authors] ...,
  • Paul Flicek
  • Ignas Bunikis
  • Arild Folkvord
  • Leif Andersson
  • First Published October 24, 2019
Corrigendum

Corrigendum: Tempo and mode of regulatory evolution in Drosophila

  • Joseph D. Coolon
  • C. Joel McManus
  • Kraig R. Stevenson
  • Brenton R. Graveley
  • Patricia J. Wittkopp
  • First Published November 1, 2018
Research

Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila

  • Marcus H. Stoiber
  • Sara Olson
  • Gemma E. May
  • Michael O. Duff
  • Jan Manent
  • Robert Obar K.G. Guruharsha Peter J. Bickel
  • ... [+3 authors] ...,
  • Spyros Artavanis-Tsakonas
  • James B. Brown
  • Brenton R. Graveley
  • Susan E. Celniker
  • First Published August 20, 2015
Resource

Regulation of alternative splicing in Drosophila by 56 RNA binding proteins

  • Angela N. Brooks
  • Michael O. Duff
  • Gemma May
  • Li Yang
  • Mohan Bolisetty
  • Jane Landolin Ken Wan Jeremy Sandler
  • ... [+3 authors] ...,
  • Benjamin W. Booth
  • Susan E. Celniker
  • Brenton R. Graveley
  • Steven E. Brenner
  • First Published August 20, 2015
Resource

Comparative validation of the D. melanogaster modENCODE transcriptome annotation

  • Zhen-Xia Chen
  • David Sturgill
  • Jiaxin Qu
  • Huaiyang Jiang
  • Soo Park
  • Nathan Boley Ana Maria Suzuki Anthony R. Fletcher David C. Plachetzki Peter C. FitzGerald Carlo G. Artieri Joel Atallah Olga Barmina James B. Brown Kerstin P. Blankenburg Emily Clough Abhijit Dasgupta Sai Gubbala Yi Han Joy C. Jayaseelan Divya Kalra Yoo-Ah Kim Christie L. Kovar Sandra L. Lee Mingmei Li James D. Malley John H. Malone Tittu Mathew Nicolas R. Mattiuzzo Mala Munidasa Donna M. Muzny Fiona Ongeri Lora Perales Teresa M. Przytycka Ling-Ling Pu Garrett Robinson Rebecca L. Thornton Nehad Saada Steven E. Scherer Harold E. Smith Charles Vinson Crystal B. Warner Kim C. Worley Yuan-Qing Wu Xiaoyan Zou Peter Cherbas Manolis Kellis Michael B. Eisen Fabio Piano Karin Kionte David H. Fitch Paul W. Sternberg Asher D. Cutter Michael O. Duff Roger A. Hoskins Brenton R. Graveley Richard A. Gibbs Peter J. Bickel Artyom Kopp
  • ... [+54 authors] ...,
  • Piero Carninci
  • Susan E. Celniker
  • Brian Oliver
  • Stephen Richards
  • First Published July 1, 2014
Research

Tempo and mode of regulatory evolution in Drosophila

  • Joseph D. Coolon
  • C. Joel McManus
  • Kraig R. Stevenson
  • Brenton R. Graveley
  • Patricia J. Wittkopp
  • First Published February 24, 2014
Research

Evolution of splicing regulatory networks in Drosophila

  • C. Joel McManus
  • Joseph D. Coolon
  • Jodi Eipper-Mains
  • Patricia J. Wittkopp
  • Brenton R. Graveley
  • First Published February 10, 2014
Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

  • Weisheng Wu
  • Yong Cheng
  • Cheryl A. Keller
  • Jason Ernst
  • Swathi Ashok Kumar
  • Tejaswini Mishra Christapher Morrissey Christine M. Dorman Kuan-Bei Chen Daniela Drautz Belinda Giardine Yoichiro Shibata Lingyun Song Max Pimkin Gregory E. Crawford Terrence S. Furey Manolis Kellis Webb Miller James Taylor Stephan C. Schuster Yu Zhang
  • ... [+16 authors] ...,
  • Francesca Chiaromonte
  • Gerd A. Blobel
  • Mitchell J. Weiss
  • Ross C. Hardison
  • First Published July 27, 2011
Method

Genome-wide identification of conserved regulatory function in diverged sequences

  • Leila Taher
  • David M. McGaughey
  • Samantha Maragh
  • Ivy Aneas
  • Seneca L. Bessling
  • Webb Miller
  • Marcelo A. Nobrega
  • Andrew S. McCallion
  • Ivan Ovcharenko
  • First Published May 31, 2011
Research

Genome-wide analysis of promoter architecture in Drosophila melanogaster

  • Roger A. Hoskins
  • Jane M. Landolin
  • James B. Brown
  • Jeremy E. Sandler
  • Hazuki Takahashi
  • Timo Lassmann Charles Yu Benjamin W. Booth Dayu Zhang Kenneth H. Wan Li Yang Nathan Boley Justen Andrews Thomas C. Kaufman Brenton R. Graveley
  • ... [+10 authors] ...,
  • Peter J. Bickel
  • Piero Carninci
  • Joseph W. Carlson
  • Susan E. Celniker
  • First Published December 22, 2010
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