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Method

Simultaneous assessment of human genome and methylome data in a single experiment using limited deamination of methylated cytosine

  • Bo Yan
  • Duan Wang
  • Laurence Ettwiller
  • First Published June 10, 2024
Method

Methyl-SNP-seq reveals dual readouts of methylome and variome at molecule resolution while enabling target enrichment

  • Bo Yan
  • Duan Wang
  • Romualdas Vaisvila
  • Zhiyi Sun
  • Laurence Ettwiller
  • First Published November 4, 2022
Method

Comprehensive determination of transcription start sites derived from all RNA polymerases using ReCappable-seq

  • Bo Yan
  • George Tzertzinis
  • Ira Schildkraut
  • Laurence Ettwiller
  • First Published November 23, 2021
Method

Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

  • Zhiyi Sun
  • Romualdas Vaisvila
  • Laura-Madison Hussong
  • Bo Yan
  • Chloé Baum
  • Lana Saleh Mala Samaranayake Shengxi Guan Nan Dai Ivan R. Corrêa
  • ... [+5 authors] ...,
  • Sriharsa Pradhan
  • Theodore B. Davis
  • Thomas C. Evans
  • Laurence M. Ettwiller
  • First Published January 19, 2021
Research

Drosophila simulans genome provides new insights into patterns of lineage-specific divergence" > A second-generation assembly of the Drosophila simulans genome provides new insights into patterns of lineage-specific divergence

  • Tina T. Hu
  • Michael B. Eisen
  • Kevin R. Thornton
  • Peter Andolfatto
  • First Published August 30, 2012
Research

Drosophila simulans clade" > Genome sequencing reveals complex speciation in the Drosophila simulans clade

  • Daniel Garrigan
  • Sarah B. Kingan
  • Anthony J. Geneva
  • Peter Andolfatto
  • Andrew G. Clark
  • Kevin R. Thornton
  • Daven C. Presgraves
  • First Published April 13, 2012
Method

Multiplexed shotgun genotyping for rapid and efficient genetic mapping

  • Peter Andolfatto
  • Dan Davison
  • Deniz Erezyilmaz
  • Tina T. Hu
  • Joshua Mast
  • Tomoko Sunayama-Morita
  • David L. Stern
  • First Published January 13, 2011
LETTER

Drosophila melanogaster genome" > Hitchhiking effects of recurrent beneficial amino acid substitutions in the Drosophila melanogaster genome

  • Peter Andolfatto
  • First Published November 7, 2007
LETTER

Drosophila: No evidence for faster-X protein evolution" > X chromosomes and autosomes evolve at similar rates in Drosophila: No evidence for faster-X protein evolution

  • Kevin Thornton
  • Doris Bachtrog
  • Peter Andolfatto
  • First Published March 6, 2006
LETTER

Drosophila melanogaster populations" > Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations

  • Penelope R. Haddrill
  • Kevin R. Thornton
  • Brian Charlesworth
  • Peter Andolfatto
  • First Published June 1, 2005
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