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Method

Joint imputation and deconvolution of gene expression across spatial transcriptomics platforms

  • First Published November 17, 2025
Method

Partial alignment of multislice spatially resolved transcriptomics data

  • First Published August 8, 2023
Method

Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA

  • First Published June 17, 2021
Method

Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples

  • First Published September 4, 2020
Method

netNMF-sc: leveraging gene–gene interactions for imputation and dimensionality reduction in single-cell expression analysis

  • First Published January 28, 2020
Method

Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors

  • First Published October 13, 2017
Resource

GenomeVIP: a cloud platform for genomic variant discovery and interpretation

  • First Published May 18, 2017
Method

Read clouds uncover variation in complex regions of the human genome

  • First Published August 18, 2015
Method

Parente2: a fast and accurate method for detecting identity by descent

  • First Published October 1, 2014
Research

Genome evolution during progression to breast cancer

  • First Published April 8, 2013
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