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Research

Closing the gaps, and improving somatic structural variant analysis and benchmarking using CHM13-T2T

  • First Published March 17, 2025
Research

Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation

  • First Published December 5, 2024
Method

Partial alignment of multislice spatially resolved transcriptomics data

  • First Published August 8, 2023
Method

Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples

  • First Published September 4, 2020
Method

Ancestry-agnostic estimation of DNA sample contamination from sequence reads

  • First Published January 24, 2020
Method

Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors

  • First Published October 13, 2017
Resource

GenomeVIP: a cloud platform for genomic variant discovery and interpretation

  • First Published May 18, 2017
Method

An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data

  • First Published April 16, 2015
Research

The influence of genomic context on mutation patterns in the human genome inferred from rare variants

  • First Published August 29, 2013
Method

Genotype calling and haplotyping in parent-offspring trios

  • First Published October 11, 2012
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