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Resource

Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships" > Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships

  • Michelle Kudron
  • Louis Gevirtzman
  • Alec Victorsen
  • Bridget C. Lear
  • Jiahao Gao
  • Jinrui Xu Swapna Samanta Emily Frink Adri Tran-Pearson Chau Huynh Dionne Vafeados Ann Hammonds William Fisher Martha Wall Greg Wesseling Vanessa Hernandez Zhichun Lin Mary Kasparian Kevin White Ravi Allada Mark Gerstein
  • ... [+16 authors] ...,
  • LaDeana Hillier
  • Susan E. Celniker
  • Valerie Reinke
  • Robert H. Waterston
  • First Published October 22, 2024
Research

E. coli measured at single-base resolution" > Genome-wide promoter assembly in E. coli measured at single-base resolution

  • Jordan John
  • Javaid Jabbar
  • Nitika Badjatia
  • Matthew J. Rossi
  • William K.M. Lai
  • B. Franklin Pugh
  • First Published April 28, 2022
Resource

A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells

  • William K.M. Lai
  • Luca Mariani
  • Gerson Rothschild
  • Edwin R. Smith
  • Bryan J. Venters
  • Thomas R. Blanda Prashant K. Kuntala Kylie Bocklund Joshua Mairose Sarah N. Dweikat Katelyn Mistretta Matthew J. Rossi Daniela James James T. Anderson Sabrina K. Phanor Wanwei Zhang Zibo Zhao Avani P. Shah Katherine Novitzky Eileen McAnarney Michael-C. Keogh
  • ... [+16 authors] ...,
  • Ali Shilatifard
  • Uttiya Basu
  • Martha L. Bulyk
  • B. Franklin Pugh
  • First Published August 23, 2021
Resource

Caenorhabditis elegans nematodes" > Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes

  • Timothy J. Durham
  • Riza M. Daza
  • Louis Gevirtzman
  • Darren A. Cusanovich
  • Olubusayo Bolonduro
  • William Stafford Noble
  • Jay Shendure
  • Robert H. Waterston
  • First Published April 22, 2021
Research

Comparative transcriptomics of primary cells in vertebrates

  • Tanvir Alam
  • Saumya Agrawal
  • Jessica Severin
  • Robert S. Young
  • Robin Andersson
  • Erik Arner Akira Hasegawa Marina Lizio Jordan A. Ramilowski Imad Abugessaisa Yuri Ishizu Shohei Noma Hiroshi Tarui Martin S. Taylor Timo Lassmann Masayoshi Itoh Takeya Kasukawa Hideya Kawaji Luigi Marchionni Guojun Sheng Alistair R.R. Forrest
  • ... [+16 authors] ...,
  • Levon M. Khachigian
  • Yoshihide Hayashizaki
  • Piero Carninci
  • Michiel J.L. de Hoon
  • First Published July 27, 2020
Resource

C. elegans embryonic transcriptome with tissue, time, and alternative splicing resolution" > The C. elegans embryonic transcriptome with tissue, time, and alternative splicing resolution

  • Adam D. Warner
  • Louis Gevirtzman
  • LaDeana W. Hillier
  • Brent Ewing
  • Robert H. Waterston
  • First Published May 23, 2019
In memoriam

John Sulston (1942–2018)

  • Robert H. Waterston
  • First Published June 1, 2018
Research

Genome-wide determinants of sequence-specific DNA binding of general regulatory factors

  • Matthew J. Rossi
  • William K.M. Lai
  • B. Franklin Pugh
  • First Published March 21, 2018
Research

Widespread and precise reprogramming of yeast protein–genome interactions in response to heat shock

  • Vinesh Vinayachandran
  • Rohit Reja
  • Matthew J. Rossi
  • Bongsoo Park
  • Lila Rieber
  • Chitvan Mittal
  • Shaun Mahony
  • B. Franklin Pugh
  • First Published February 14, 2018
Research

Genome-wide uniformity of human ‘open’ pre-initiation complexes

  • William K.M. Lai
  • B. Franklin Pugh
  • First Published November 10, 2016
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