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Research

3C sites in poly(A) RNA" > Nanopore direct RNA sequencing reveals METTL2A-mediated m3C sites in poly(A) RNA

  • First Published October 30, 2025
Method

Early embryonic mutations reveal dynamics of somatic and germ cell lineages in mice

  • First Published May 9, 2022
Research

Drosophila" > Shared evolutionary trajectories of three independent neo-sex chromosomes in Drosophila

  • First Published October 21, 2021
Research

Positive selective sweeps of epigenetic mutations regulating specialized metabolites in plants

  • First Published May 18, 2021
Research

Long-read sequencing for non-small-cell lung cancer genomes

  • First Published September 4, 2020
Method

Metabolic labeling of RNA using multiple ribonucleoside analogs enables the simultaneous evaluation of RNA synthesis and degradation rates

  • First Published August 25, 2020
Research

Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes

  • First Published May 18, 2017
Research

A GC-rich sequence feature in the 3′ UTR directs UPF1-dependent mRNA decay in mammalian cells

  • First Published December 9, 2016
Resource

Ciona intestinalis" > Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalis

  • First Published December 14, 2015
Research

Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice

  • First Published June 30, 2015
Research

Plasmodium falciparum" > Interactive transcriptome analysis of malaria patients and infecting Plasmodium falciparum

  • First Published August 4, 2014
Resource

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

  • First Published April 22, 2014
Resource

A biochemical landscape of A-to-I RNA editing in the human brain transcriptome

  • First Published January 9, 2014
Resource

Coelacanth genomes reveal signatures for evolutionary transition from water to land

  • First Published July 22, 2013
Resource

The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains

  • First Published April 19, 2013
Research

High-resolution DNA methylome analysis of primordial germ cells identifies gender-specific reprogramming in mice

  • First Published February 14, 2013
Research

Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus

  • First Published November 6, 2012
Research

Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns

  • First Published June 11, 2012
Research

Evolutionary history of novel genes on the tammar wallaby Y chromosome: Implications for sex chromosome evolution

  • First Published November 29, 2011
Resource

Genome-wide characterization of transcriptional start sites in humans by integrative transcriptome analysis

  • First Published March 3, 2011
Research

Nucleotide composition-linked divergence of vertebrate core promoter architecture

  • First Published January 10, 2011
Research

Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences

  • First Published June 9, 2010
LETTER

Distinct class of putative “non-conserved” promoters in humans: Comparative studies of alternative promoters of human and mouse genes

  • First Published June 13, 2007
LETTER

Toxoplasma gondii" > Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii

  • First Published August 10, 2006
LETTER

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

  • First Published December 12, 2005
Chicken Special/Letters

Ascl2/Mash2–Igf2–H19 region" > Structural and functional analysis of a 0.5-Mb chicken region orthologous to the imprinted mammalian Ascl2/Mash2–Igf2–H19 region

  • First Published December 8, 2004
LETTER

Mus musculus molossinus to genomic constitution of strain C57BL/6J, as defined by BAC-end sequence–SNP analysis" > Contribution of Asian mouse subspecies Mus musculus molossinus to genomic constitution of strain C57BL/6J, as defined by BAC-end sequence–SNP analysis

  • First Published December 1, 2004
LETTER

Analysis of Small Human Proteins Reveals the Translation of Upstream Open Reading Frames of mRNAs

  • First Published October 15, 2004
LETTER

Sequence Comparison of Human and Mouse Genes Reveals a Homologous Block Structure in the Promoter Regions

  • First Published September 1, 2004
RESOURCE

Fugu ESTs: New Resources for Transcription Analysis and Genome Annotation" > Fugu ESTs: New Resources for Transcription Analysis and Genome Annotation

  • First Published January 1, 2003
LETTER

Comparative Genomic Sequence Analysis of the Human Chromosome 21 Down Syndrome Critical Region

  • First Published September 1, 2002
REPORT

Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes

  • First Published April 11, 2001
METHODS

CART Classification of Human 5′ UTR Sequences

  • First Published November 8, 2000
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