Search | Genome Research

Single-cell template strand sequencing reveals culture-induced chromosomal instability in a gibbon cell line

Alessia Daponte
Gerardina Chirico
Annalisa Paparella
Annalaura Montanari
Caterina Manzari
Martina Macino Oliver Dionisi Dyck Francesco De Leonardis Flavia Angela Maria Maggiolini Alberto L'Abbate Francesco Montinaro Sandra Louzada
... [+7 authors] ...,
Mario Ventura
Ashley D. Sanders
Francesca Antonacci
Claudia Rita Catacchio

First Published May 4, 2026

Gaps and complex structurally variant loci in phased genome assemblies

David Porubsky
Mitchell R. Vollger
William T. Harvey
Allison N. Rozanski
Peter Ebert
Glenn Hickey Patrick Hasenfeld Ashley D. Sanders Catherine Stober Jan O. Korbel Benedict Paten Tobias Marschall Evan E. Eichler Haley J. Abel Lucinda L. Antonacci-Fulton Mobin Asri Gunjan Baid Carl A. Baker Anastasiya Belyaeva Konstantinos Billis Guillaume Bourque Silvia Buonaiuto Andrew Carroll Mark J.P. Chaisson Pi-Chuan Chang Xian H. Chang Haoyu Cheng Justin Chu Sarah Cody Vincenza Colonna Daniel E. Cook Robert M. Cook-Deegan Omar E. Cornejo Mark Diekhans Daniel Doerr Peter Ebert Jana Ebler Evan E. Eichler Jordan M. Eizenga Susan Fairley Olivier Fedrigo Adam L. Felsenfeld Xiaowen Feng Christian Fischer Paul Flicek Giulio Formenti Adam Frankish Robert S. Fulton Yan Gao Shilpa Garg Erik Garrison Nanibaa’ A. Garrison Carlos Garcia Giron Richard E. Green Cristian Groza Andrea Guarracino Leanne Haggerty Ira M. Hall William T. Harvey Marina Haukness David Haussler Simon Heumos Glenn Hickey Kendra Hoekzema Thibaut Hourlier Kerstin Howe Miten Jain Erich D. Jarvis Hanlee P. Ji Eimear E. Kenny Barbara A. Koenig Alexey Kolesnikov Jan O. Korbel Jennifer Kordosky Sergey Koren HoJoon Lee Alexandra P. Lewis Heng Li Wen-Wei Liao Shuangjia Lu Tsung-Yu Lu Julian K. Lucas Hugo Magalhães Santiago Marco-Sola Pierre Marijon Charles Markello Tobias Marschall Fergal J. Martin Ann McCartney Jennifer McDaniel Karen H. Miga Matthew W. Mitchell Jean Monlong Jacquelyn Mountcastle Katherine M. Munson Moses Njagi Mwaniki Maria Nattestad Adam M. Novak Sergey Nurk Hugh E. Olsen Nathan D. Olson Benedict Paten Trevor Pesout Adam M. Phillippy Alice B. Popejoy David Porubsky Pjotr Prins Daniela Puiu Mikko Rautiainen Allison A. Regier Arang Rhie Samuel Sacco Ashley D. Sanders Valerie A. Schneider Baergen I. Schultz Kishwar Shafin Jonas A. Sibbesen Jouni Sirén Michael W. Smith Heidi J. Sofia Ahmad N. Abou Tayoun Françoise Thibaud-Nissen Chad Tomlinson Francesca Floriana Tricomi Flavia Villani Mitchell R. Vollger Justin Wagner Brian Walenz
... [+123 authors] ...,
Ting Wang
Jonathan M.D. Wood
Aleksey V. Zimin
Justin M. Zook

First Published May 10, 2023

A high-resolution map of small-scale inversions in the gibbon genome

Ludovica Mercuri
Donato Palmisano
Alberto L'Abbate
Pietro D'Addabbo
Francesco Montinaro
Claudia Rita Catacchio Patrick Hasenfeld Mario Ventura
... [+3 authors] ...,
Jan O. Korbel
Ashley D. Sanders
Flavia Angela Maria Maggiolini
Francesca Antonacci

First Published September 30, 2022

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

Flavia Angela Maria Maggiolini
Ashley D. Sanders
Colin James Shew
Arvis Sulovari
Yafei Mao
Marta Puig Claudia Rita Catacchio Maria Dellino Donato Palmisano Ludovica Mercuri Miriana Bitonto David Porubský Mario Cáceres Evan E. Eichler
... [+9 authors] ...,
Mario Ventura
Megan Y. Dennis
Jan O. Korbel
Francesca Antonacci

First Published October 22, 2020

Direct chromosome-length haplotyping by single-cell sequencing

David Porubský
Ashley D. Sanders
Niek van Wietmarschen
Ester Falconer
Mark Hills
Diana C.J. Spierings
Marianna R. Bevova
Victor Guryev
Peter M. Lansdorp

First Published September 19, 2016

Characterizing polymorphic inversions in human genomes by single-cell sequencing

Ashley D. Sanders
Mark Hills
David Porubský
Victor Guryev
Ester Falconer
Peter M. Lansdorp

First Published July 29, 2016

Corrigendum: Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

Jennifer Y. Tan
Tamara Sirey
Frantisek Honti
Bryony Graham
Allison Piovesan
Matthias Merkenschlager
Caleb Webber
Chris P. Ponting
Ana C. Marques

First Published September 1, 2015

Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

Jennifer Y. Tan
Tamara Sirey
Frantisek Honti
Bryony Graham
Allison Piovesan
Matthias Merkenschlager
Caleb Webber
Chris P. Ponting
Ana C. Marques

First Published March 19, 2015

RBFOX and PTBP1 proteins regulate the alternative splicing of micro-exons in human brain transcripts

Yang I. Li
Luis Sanchez-Pulido
Wilfried Haerty
Chris P. Ponting

First Published December 18, 2014

Violation of the 12/23 rule of genomic V(D)J recombination is common in lymphocytes

Nicholas J. Parkinson
Matthew Roddis
Ben Ferneyhough
Gang Zhang
Adam J. Marsden
Siarhei Maslau Yasmin Sanchez-Pearson Thomas Barthlott Ian R. Humphreys Kristin Ladell
... [+5 authors] ...,
David A. Price
Chris P. Ponting
Georg Hollander
Michael D. Fischer

First Published November 3, 2014

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Single-cell template strand sequencing reveals culture-induced chromosomal instability in a gibbon cell line

Gaps and complex structurally variant loci in phased genome assemblies

A high-resolution map of small-scale inversions in the gibbon genome

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

Direct chromosome-length haplotyping by single-cell sequencing

Characterizing polymorphic inversions in human genomes by single-cell sequencing

Corrigendum: Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

RBFOX and PTBP1 proteins regulate the alternative splicing of micro-exons in human brain transcripts

Violation of the 12/23 rule of genomic V(D)J recombination is common in lymphocytes

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Your search for returned 31 results