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Joint imputation and deconvolution of gene expression across spatial transcriptomics platforms

  • First Published November 17, 2025

Partial alignment of multislice spatially resolved transcriptomics data

  • First Published August 8, 2023

Reconstruction of clone- and haplotype-specific cancer genome karyotypes from bulk tumor samples

  • First Published September 4, 2020

netNMF-sc: leveraging gene–gene interactions for imputation and dimensionality reduction in single-cell expression analysis

  • First Published January 28, 2020

Single-cell sequencing data reveal widespread recurrence and loss of mutational hits in the life histories of tumors

  • First Published October 13, 2017

GenomeVIP: a cloud platform for genomic variant discovery and interpretation

  • First Published May 18, 2017

Read clouds uncover variation in complex regions of the human genome

  • First Published August 18, 2015

Discovery of recurrent structural variants in nasopharyngeal carcinoma

  • First Published November 8, 2013

Genome evolution during progression to breast cancer

  • First Published April 8, 2013

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

  • First Published March 11, 2013
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