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Method

Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs

  • Michiel de Hoon
  • Alessandro Bonetti
  • Charles Plessy
  • Yoshinari Ando
  • Chung-Chau Hon
  • Yuri Ishizu Masayoshi Itoh Sachi Kato Dongyan Lin Sho Maekawa Mitsuyoshi Murata Hiromi Nishiyori Jay W. Shin Jens Stolte Ana Maria Suzuki Michihira Tagami Hazuki Takahashi Supat Thongjuea
  • ... [+13 authors] ...,
  • Alistair R.R. Forrest
  • Yoshihide Hayashizaki
  • Juha Kere
  • Piero Carninci
  • First Published August 12, 2022
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

  • Sumantra Chatterjee
  • Kameko M. Karasaki
  • Lauren E. Fries
  • Ashish Kapoor
  • Aravinda Chakravarti
  • First Published November 15, 2021
Method

Sequence-based correction of barcode bias in massively parallel reporter assays

  • Dongwon Lee
  • Ashish Kapoor
  • Changhee Lee
  • Michael Mudgett
  • Michael A. Beer
  • Aravinda Chakravarti
  • First Published July 20, 2021
Research

Complex mosaic structural variations in human fetal brains

  • Shobana Sekar
  • Livia Tomasini
  • Christos Proukakis
  • Taejeong Bae
  • Logan Manlove
  • Yeongjun Jang Soraya Scuderi Bo Zhou Maria Kalyva Anahita Amiri Jessica Mariani
  • ... [+6 authors] ...,
  • Fritz J. Sedlazeck
  • Alexander E. Urban
  • Flora M. Vaccarino
  • Alexej Abyzov
  • First Published October 29, 2020
Research

Comparative transcriptomics of primary cells in vertebrates

  • Tanvir Alam
  • Saumya Agrawal
  • Jessica Severin
  • Robert S. Young
  • Robin Andersson
  • Erik Arner Akira Hasegawa Marina Lizio Jordan A. Ramilowski Imad Abugessaisa Yuri Ishizu Shohei Noma Hiroshi Tarui Martin S. Taylor Timo Lassmann Masayoshi Itoh Takeya Kasukawa Hideya Kawaji Luigi Marchionni Guojun Sheng Alistair R.R. Forrest
  • ... [+16 authors] ...,
  • Levon M. Khachigian
  • Yoshihide Hayashizaki
  • Piero Carninci
  • Michiel J.L. de Hoon
  • First Published July 27, 2020
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • Dongwon Lee
  • Ashish Kapoor
  • Alexias Safi
  • Lingyun Song
  • Marc K. Halushka
  • Gregory E. Crawford
  • Aravinda Chakravarti
  • First Published August 23, 2018
Research

TERT aberrations in acral melanoma" > Integrated genomic analyses reveal frequent TERT aberrations in acral melanoma

  • Winnie S. Liang
  • William Hendricks
  • Jeffrey Kiefer
  • Jessica Schmidt
  • Shobana Sekar
  • John Carpten David W. Craig Jonathan Adkins Lori Cuyugan Zarko Manojlovic Rebecca F. Halperin Adrienne Helland Sara Nasser Christophe Legendre Laurence H. Hurley Karthigayini Sivaprakasam Douglas B. Johnson Holly Crandall Klaus J. Busam Victoria Zismann Valerie Deluca Jeeyun Lee
  • ... [+17 authors] ...,
  • Aleksandar Sekulic
  • Charlotte E. Ariyan
  • Jeffrey Sosman
  • Jeffrey Trent
  • First Published April 3, 2017
Research

The frequent evolutionary birth and death of functional promoters in mouse and human

  • Robert S. Young
  • Yoshihide Hayashizaki
  • Robin Andersson
  • Albin Sandelin
  • Hideya Kawaji
  • Masayoshi Itoh Timo Lassmann
  • ... [+2 authors] ...,
  • Piero Carninci
  • Wendy A. Bickmore
  • Alistair R. Forrest
  • Martin S. Taylor
  • First Published July 30, 2015
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