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In memoriam

Jim Watson (1928–2025): a genomics visionary

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Anne C. Ferguson-Smith
  • Richard A. Gibbs
  • Eric D. Green
  • John R. Inglis
  • Kateryna D. Makova
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published July 23, 2026
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

  • Sumantra Chatterjee
  • Kameko M. Karasaki
  • Lauren E. Fries
  • Ashish Kapoor
  • Aravinda Chakravarti
  • First Published November 15, 2021
Method

Sequence-based correction of barcode bias in massively parallel reporter assays

  • Dongwon Lee
  • Ashish Kapoor
  • Changhee Lee
  • Michael Mudgett
  • Michael A. Beer
  • Aravinda Chakravarti
  • First Published July 20, 2021
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • Dongwon Lee
  • Ashish Kapoor
  • Alexias Safi
  • Lingyun Song
  • Marc K. Halushka
  • Gregory E. Crawford
  • Aravinda Chakravarti
  • First Published August 23, 2018
Method

High-throughput single-cell DNA sequencing of acute myeloid leukemia tumors with droplet microfluidics

  • Maurizio Pellegrino
  • Adam Sciambi
  • Sebastian Treusch
  • Robert Durruthy-Durruthy
  • Kaustubh Gokhale
  • Jose Jacob Tina X. Chen Jennifer A. Geis William Oldham Jairo Matthews Hagop Kantarjian P. Andrew Futreal
  • ... [+7 authors] ...,
  • Keyur Patel
  • Keith W. Jones
  • Koichi Takahashi
  • Dennis J. Eastburn
  • First Published August 7, 2018
Insight/Outlook

Genomic contributions to Mendelian disease

  • Aravinda Chakravarti
  • First Published May 2, 2011
Methods

Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes

  • Nitin Gupta
  • Jamal Benhamida
  • Vipul Bhargava
  • Daniel Goodman
  • Elisabeth Kain
  • Ian Kerman Ngan Nguyen Noah Ollikainen Jesse Rodriguez Jian Wang Mary S. Lipton
  • ... [+6 authors] ...,
  • Margaret Romine
  • Vineet Bafna
  • Richard D. Smith
  • Pavel A. Pevzner
  • First Published April 21, 2008
Methods

Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation

  • Nitin Gupta
  • Stephen Tanner
  • Navdeep Jaitly
  • Joshua N. Adkins
  • Mary Lipton
  • Robert Edwards Margaret Romine
  • ... [+2 authors] ...,
  • Andrei Osterman
  • Vineet Bafna
  • Richard D. Smith
  • Pavel A. Pevzner
  • First Published August 9, 2007
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