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Resource

Caenorhabditis elegans" > CGC1, a new reference genome for Caenorhabditis elegans

  • Kazuki Ichikawa
  • Massa J. Shoura
  • Karen L. Artiles
  • Dae-Eun Jeong
  • Chie Owa
  • Haruka Kobayashi Yoshihiko Suzuki Manami Kanamori Yu Toyoshima Yuichi Iino Ann E. Rougvie
  • ... [+6 authors] ...,
  • Lamia Wahba
  • Andrew Z. Fire
  • Erich M. Schwarz
  • Shinichi Morishita
  • First Published July 15, 2025
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

  • Sumantra Chatterjee
  • Kameko M. Karasaki
  • Lauren E. Fries
  • Ashish Kapoor
  • Aravinda Chakravarti
  • First Published November 15, 2021
Method

Sequence-based correction of barcode bias in massively parallel reporter assays

  • Dongwon Lee
  • Ashish Kapoor
  • Changhee Lee
  • Michael Mudgett
  • Michael A. Beer
  • Aravinda Chakravarti
  • First Published July 20, 2021
Resource

Caenorhabditis elegans genome" > Recompleting the Caenorhabditis elegans genome

  • Jun Yoshimura
  • Kazuki Ichikawa
  • Massa J. Shoura
  • Karen L. Artiles
  • Idan Gabdank
  • Lamia Wahba Cheryl L. Smith Mark L. Edgley
  • ... [+3 authors] ...,
  • Ann E. Rougvie
  • Andrew Z. Fire
  • Shinichi Morishita
  • Erich M. Schwarz
  • First Published May 23, 2019
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • Dongwon Lee
  • Ashish Kapoor
  • Alexias Safi
  • Lingyun Song
  • Marc K. Halushka
  • Gregory E. Crawford
  • Aravinda Chakravarti
  • First Published August 23, 2018
Research

Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns

  • Wei Qu
  • Shin-ichi Hashimoto
  • Atsuko Shimada
  • Yoichiro Nakatani
  • Kazuki Ichikawa
  • Taro L. Saito Katsumi Ogoshi Kouji Matsushima
  • ... [+3 authors] ...,
  • Yutaka Suzuki
  • Sumio Sugano
  • Hiroyuki Takeda
  • Shinichi Morishita
  • First Published June 11, 2012
Insight/Outlook

Genomic contributions to Mendelian disease

  • Aravinda Chakravarti
  • First Published May 2, 2011
LETTER

Human embryonic stem cells have a unique epigenetic signature

  • Marina Bibikova
  • Eugene Chudin
  • Bonnie Wu
  • Lixin Zhou
  • Eliza Wickham Garcia
  • Ying Liu Soojung Shin Todd W. Plaia Jonathan M. Auerbach Dan E. Arking Rodolfo Gonzalez Jeremy Crook Bruce Davidson Thomas C. Schulz Allan Robins Aparna Khanna Peter Sartipy Johan Hyllner Padmavathy Vanguri Smita Savant-Bhonsale Alan K. Smith Aravinda Chakravarti Anirban Maitra
  • ... [+18 authors] ...,
  • Mahendra Rao
  • David L. Barker
  • Jeanne F. Loring
  • Jian-Bing Fan
  • First Published August 9, 2006
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