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In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

  • Sumantra Chatterjee
  • Kameko M. Karasaki
  • Lauren E. Fries
  • Ashish Kapoor
  • Aravinda Chakravarti
  • First Published November 15, 2021
Method

Sequence-based correction of barcode bias in massively parallel reporter assays

  • Dongwon Lee
  • Ashish Kapoor
  • Changhee Lee
  • Michael Mudgett
  • Michael A. Beer
  • Aravinda Chakravarti
  • First Published July 20, 2021
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • Dongwon Lee
  • Ashish Kapoor
  • Alexias Safi
  • Lingyun Song
  • Marc K. Halushka
  • Gregory E. Crawford
  • Aravinda Chakravarti
  • First Published August 23, 2018
Research

TBR1 regulates autism risk genes in the developing neocortex

  • James H. Notwell
  • Whitney E. Heavner
  • Siavash Fazel Darbandi
  • Sol Katzman
  • William L. McKenna
  • Christian F. Ortiz-Londono David Tastad Matthew J. Eckler
  • ... [+3 authors] ...,
  • John L.R. Rubenstein
  • Susan K. McConnell
  • Bin Chen
  • Gill Bejerano
  • First Published June 20, 2016
Research

Microbiota modulate transcription in the intestinal epithelium without remodeling the accessible chromatin landscape

  • J. Gray Camp
  • Christopher L. Frank
  • Colin R. Lickwar
  • Harendra Guturu
  • Tomas Rube
  • Aaron M. Wenger
  • ... [+1 authors] ...,
  • Jenny Chen
  • Gill Bejerano
  • Gregory E. Crawford
  • John F. Rawls
  • First Published June 24, 2014
Resource

PRISM offers a comprehensive genomic approach to transcription factor function prediction

  • Aaron M. Wenger
  • Shoa L. Clarke
  • Harendra Guturu
  • Jenny Chen
  • Bruce T. Schaar
  • Cory Y. McLean
  • Gill Bejerano
  • First Published February 4, 2013
Research

Coding exons function as tissue-specific enhancers of nearby genes

  • Ramon Y. Birnbaum
  • E. Josephine Clowney
  • Orly Agamy
  • Mee J. Kim
  • Jingjing Zhao
  • Takayuki Yamanaka Zachary Pappalardo Shoa L. Clarke Aaron M. Wenger Loan Nguyen Fiorella Gurrieri David B. Everman Charles E. Schwartz
  • ... [+8 authors] ...,
  • Ohad S. Birk
  • Gill Bejerano
  • Stavros Lomvardas
  • Nadav Ahituv
  • First Published March 22, 2012
Insight/Outlook

Genomic contributions to Mendelian disease

  • Aravinda Chakravarti
  • First Published May 2, 2011
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