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In memoriam

Jim Watson (1928–2025): a genomics visionary

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Anne C. Ferguson-Smith
  • Richard A. Gibbs
  • Eric D. Green
  • John R. Inglis
  • Kateryna D. Makova
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published July 23, 2026
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

RET regulatory code is disrupted in Hirschsprung disease" > A multi-enhancer RET regulatory code is disrupted in Hirschsprung disease

  • Sumantra Chatterjee
  • Kameko M. Karasaki
  • Lauren E. Fries
  • Ashish Kapoor
  • Aravinda Chakravarti
  • First Published November 15, 2021
Method

Sequence-based correction of barcode bias in massively parallel reporter assays

  • Dongwon Lee
  • Ashish Kapoor
  • Changhee Lee
  • Michael Mudgett
  • Michael A. Beer
  • Aravinda Chakravarti
  • First Published July 20, 2021
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • Dongwon Lee
  • Ashish Kapoor
  • Alexias Safi
  • Lingyun Song
  • Marc K. Halushka
  • Gregory E. Crawford
  • Aravinda Chakravarti
  • First Published August 23, 2018
Research

Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects

  • Jeremy M. Simon
  • Kathryn E. Hacker
  • Darshan Singh
  • A. Rose Brannon
  • Joel S. Parker
  • Matthew Weiser Thai H. Ho Pei-Fen Kuan Eric Jonasch Terrence S. Furey
  • ... [+5 authors] ...,
  • Jan F. Prins
  • Jason D. Lieb
  • W. Kimryn Rathmell
  • Ian J. Davis
  • First Published October 24, 2013
Research

DNase-seq predicts regions of rotational nucleosome stability across diverse human cell types

  • Deborah R. Winter
  • Lingyun Song
  • Sayan Mukherjee
  • Terrence S. Furey
  • Gregory E. Crawford
  • First Published May 8, 2013
Research

Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions

  • Nathan C. Sheffield
  • Robert E. Thurman
  • Lingyun Song
  • Alexias Safi
  • John A. Stamatoyannopoulos
  • Boris Lenhard
  • Gregory E. Crawford
  • Terrence S. Furey
  • First Published March 12, 2013
Resource

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

  • Jie Wang
  • Jiali Zhuang
  • Sowmya Iyer
  • XinYing Lin
  • Troy W. Whitfield
  • Melissa C. Greven Brian G. Pierce Xianjun Dong Anshul Kundaje Yong Cheng Oliver J. Rando Ewan Birney
  • ... [+7 authors] ...,
  • Richard M. Myers
  • William S. Noble
  • Michael Snyder
  • Zhiping Weng
  • First Published September 5, 2012
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