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Research

Integrating short-read and long-read single-cell RNA sequencing for comprehensive transcriptome profiling in mouse retina

  • Meng Wang
  • Yumei Li
  • Jun Wang
  • Soo Hwan Oh
  • Yexuan Cao
  • Rui Chen
  • First Published March 6, 2025
Method

CodonBERT large language model for mRNA vaccines

  • Sizhen Li
  • Saeed Moayedpour
  • Ruijiang Li
  • Michael Bailey
  • Saleh Riahi
  • Lorenzo Kogler-Anele Milad Miladi Jacob Miner Fabien Pertuy Dinghai Zheng Jun Wang Akshay Balsubramani Khang Tran Minnie Zacharia Monica Wu Xiaobo Gu Ryan Clinton Carla Asquith Joseph Skaleski Lianne Boeglin Sudha Chivukula Anusha Dias Tod Strugnell
  • ... [+18 authors] ...,
  • Fernando Ulloa Montoya
  • Vikram Agarwal
  • Ziv Bar-Joseph
  • Sven Jager
  • First Published July 1, 2024
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Method

Predicting unrecognized enhancer-mediated genome topology by an ensemble machine learning model

  • Li Tang
  • Matthew C. Hill
  • Jun Wang
  • Jianxin Wang
  • James F. Martin
  • Min Li
  • First Published November 12, 2020
Corrigendum

C. elegans and human cancers" > Corrigendum: Mutational signatures of DNA mismatch repair deficiency in C. elegans and human cancers

  • Bettina Meier
  • Nadezda V. Volkova
  • Ye Hong
  • Pieta Schofield
  • Peter J. Campbell
  • Moritz Gerstung
  • Anton Gartner
  • First Published September 3, 2019
Research

C. elegans and human cancers" > Mutational signatures of DNA mismatch repair deficiency in C. elegans and human cancers

  • Bettina Meier
  • Nadezda V. Volkova
  • Ye Hong
  • Pieta Schofield
  • Peter J. Campbell
  • Moritz Gerstung
  • Anton Gartner
  • First Published April 10, 2018
Resource

Assembly and analysis of 100 full MHC haplotypes from the Danish population

  • Jacob M. Jensen
  • Palle Villesen
  • Rune M. Friborg
  • Thomas Mailund
  • Søren Besenbacher
  • Mikkel H. Schierup Lasse Maretty Jacob Malte Jensen Bent Petersen Jonas Andreas Sibbesen Siyang Liu Palle Villesen Laurits Skov Kirstine Belling Christian Theil Have Jose M.G. Izarzugaza Marie Grosjean Jette Bork-Jensen Jakob Grove Thomas D. Als Shujia Huang Yuqi Chang Ruiqi Xu Weijian Ye Junhua Rao Xiaosen Guo Jihua Sun Hongzhi Cao Chen Ye Johan v Beusekom Thomas Espeseth Esben Flindt Rune M. Friborg Anders E. Halager Stephanie Le Hellard Christina M. Hultman Francesco Lescai Shengting Li Ole Lund Peter Løngren Thomas Mailund Maria Luisa Matey-Hernandez Ole Mors Christian N.S. Pedersen Thomas Sicheritz-Pontén Patrick Sullivan Ali Syed David Westergaard Rachita Yadav Ning Li Xun Xu Torben Hansen Anders Krogh Lars Bolund Thorkild I.A. Sørensen Oluf Pedersen Ramneek Gupta Simon Rasmussen Søren Besenbacher Anders D. Børglum Jun Wang
  • ... [+56 authors] ...,
  • Hans Eiberg
  • Karsten Kristiansen
  • Søren Brunak
  • Mikkel Heide Schierup
  • First Published August 3, 2017
Research

SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes

  • Yue Shen
  • Giovanni Stracquadanio
  • Yun Wang
  • Kun Yang
  • Leslie A. Mitchell
  • Yaxin Xue Yizhi Cai Tai Chen Jessica S. Dymond Kang Kang Jianhui Gong Xiaofan Zeng Yongfen Zhang Yingrui Li Qiang Feng Xun Xu Jun Wang
  • ... [+12 authors] ...,
  • Jian Wang
  • Huanming Yang
  • Jef D. Boeke
  • Joel S. Bader
  • First Published November 13, 2015
Research

C. elegans whole-genome sequencing reveals mutational signatures related to carcinogens and DNA repair deficiency" > C. elegans whole-genome sequencing reveals mutational signatures related to carcinogens and DNA repair deficiency

  • Bettina Meier
  • Susanna L. Cooke
  • Joerg Weiss
  • Aymeric P. Bailly
  • Ludmil B. Alexandrov
  • John Marshall Keiran Raine Mark Maddison
  • ... [+3 authors] ...,
  • Elizabeth Anderson
  • Michael R. Stratton
  • Anton Gartner
  • Peter J. Campbell
  • First Published July 16, 2014
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