Method
Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses
- First Published February 14, 2020
Method
Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation
- First Published February 2, 2015
Method
Mapping functional transcription factor networks from gene expression data
- First Published May 1, 2013
Research
Comparative RNA sequencing reveals substantial genetic variation in endangered primates
- First Published December 29, 2011
Resource
Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines
- First Published December 22, 2010
RESOURCE
Development and application of a phylogenomic toolkit: Resolving the evolutionary history of Madagascar’s lemurs
- First Published February 1, 2008
Methods
Targeted discovery of novel human exons by comparative genomics
- First Published November 7, 2007
Methods
A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices
- First Published January 8, 2007
RESOURCE
Iterative gene prediction and pseudogene removal improves genome annotation
- First Published May 1, 2006
PERSPECTIVE
Genome annotation past, present, and future: How to define an ORF at each locus
- First Published December 8, 2005