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Remodeling of epigenome and transcriptome landscapes with aging in mice reveals widespread induction of inflammatory responses

  • Bérénice A. Benayoun
  • Elizabeth A. Pollina
  • Param Priya Singh
  • Salah Mahmoudi
  • Itamar Harel
  • Kerriann M. Casey
  • Ben W. Dulken
  • Anshul Kundaje
  • Anne Brunet
  • First Published March 11, 2019
Resource

C. elegans" > Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans

  • Aaron C. Daugherty
  • Robin W. Yeo
  • Jason D. Buenrostro
  • William J. Greenleaf
  • Anshul Kundaje
  • Anne Brunet
  • First Published November 15, 2017
Resource

Assemblathon 1: A competitive assessment of de novo short read assembly methods

  • Dent Earl
  • Keith Bradnam
  • John St. John
  • Aaron Darling
  • Dawei Lin
  • Joseph Fass Hung On Ken Yu Vince Buffalo Daniel R. Zerbino Mark Diekhans Ngan Nguyen Pramila Nuwantha Ariyaratne Wing-Kin Sung Zemin Ning Matthias Haimel Jared T. Simpson Nuno A. Fonseca İnanç Birol T. Roderick Docking Isaac Y. Ho Daniel S. Rokhsar Rayan Chikhi Dominique Lavenier Guillaume Chapuis Delphine Naquin Nicolas Maillet Michael C. Schatz David R. Kelley Adam M. Phillippy Sergey Koren Shiaw-Pyng Yang Wei Wu Wen-Chi Chou Anuj Srivastava Timothy I. Shaw J. Graham Ruby Peter Skewes-Cox Miguel Betegon Michelle T. Dimon Victor Solovyev Igor Seledtsov Petr Kosarev Denis Vorobyev Ricardo Ramirez-Gonzalez Richard Leggett Dan MacLean Fangfang Xia Ruibang Luo Zhenyu Li Yinlong Xie Binghang Liu Sante Gnerre Iain MacCallum Dariusz Przybylski Filipe J. Ribeiro Shuangye Yin Ted Sharpe Giles Hall Paul J. Kersey Richard Durbin Shaun D. Jackman Jarrod A. Chapman Xiaoqiu Huang Joseph L. DeRisi Mario Caccamo Yingrui Li David B. Jaffe
  • ... [+62 authors] ...,
  • Richard E. Green
  • David Haussler
  • Ian Korf
  • Benedict Paten
  • First Published September 16, 2011
Resource

MicroRNA programs in normal and aberrant stem and progenitor cells

  • Christopher P. Arnold
  • Ruoying Tan
  • Baiyu Zhou
  • Si-Biao Yue
  • Steven Schaffert
  • Joseph R. Biggs Regis Doyonnas Miao-Chia Lo John M. Perry Valérie M. Renault Alessandra Sacco Tim Somervaille Patrick Viatour Anne Brunet Michael L. Cleary Linheng Li Julien Sage
  • ... [+12 authors] ...,
  • Dong-Er Zhang
  • Helen M. Blau
  • Caifu Chen
  • Chang-Zheng Chen
  • First Published March 30, 2011
12 | Genomes/Letter

Drosophila microRNAs" > Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs

  • J. Graham Ruby
  • Alexander Stark
  • Wendy K. Johnston
  • Manolis Kellis
  • David P. Bartel
  • Eric C. Lai
  • First Published November 7, 2007
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