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Research

Enhancers display constrained sequence flexibility and context-specific modulation of motif function

  • Franziska Reiter
  • Bernardo P. de Almeida
  • Alexander Stark
  • First Published March 20, 2023
Research

Dissection of thousands of cell type-specific enhancers identifies dinucleotide repeat motifs as general enhancer features

  • J. Omar Yáñez-Cuna
  • Cosmas D. Arnold
  • Gerald Stampfel
  • Łukasz M. Boryń
  • Daniel Gerlach
  • Martina Rath
  • Alexander Stark
  • First Published April 8, 2014
Method

cis-regulatory sequence requirements for context-specific transcription factor binding" > Uncovering cis-regulatory sequence requirements for context-specific transcription factor binding

  • J. Omar Yáñez-Cuna
  • Huy Q. Dinh
  • Evgeny Z. Kvon
  • Daria Shlyueva
  • Alexander Stark
  • First Published April 25, 2012
Platypus Special/Letter

Conservation of small RNA pathways in platypus

  • Elizabeth P. Murchison
  • Pouya Kheradpour
  • Ravi Sachidanandam
  • Carly Smith
  • Emily Hodges
  • Zhenyu Xuan
  • ... [+1 authors] ...,
  • Manolis Kellis
  • Frank Grützner
  • Alexander Stark
  • Gregory J. Hannon
  • First Published May 7, 2008
12 Drosophila Genomes/Methods

Drosophila genomes" > Reliable prediction of regulator targets using 12 Drosophila genomes

  • Pouya Kheradpour
  • Alexander Stark
  • Sushmita Roy
  • Manolis Kellis
  • First Published November 7, 2007
12 Drosophila Genomes/Letter

Drosophila microRNAs" > Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs

  • J. Graham Ruby
  • Alexander Stark
  • Wendy K. Johnston
  • Manolis Kellis
  • David P. Bartel
  • Eric C. Lai
  • First Published November 7, 2007
12 Drosophila Genomes/Letter

Drosophila genomes" > Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes

  • Alexander Stark
  • Pouya Kheradpour
  • Leopold Parts
  • Julius Brennecke
  • Emily Hodges
  • Gregory J. Hannon
  • Manolis Kellis
  • First Published November 7, 2007
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