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Research

Complex mosaic structural variations in human fetal brains

  • Shobana Sekar
  • Livia Tomasini
  • Christos Proukakis
  • Taejeong Bae
  • Logan Manlove
  • Yeongjun Jang Soraya Scuderi Bo Zhou Maria Kalyva Anahita Amiri Jessica Mariani
  • ... [+6 authors] ...,
  • Fritz J. Sedlazeck
  • Alexander E. Urban
  • Flora M. Vaccarino
  • Alexej Abyzov
  • First Published October 29, 2020
Resource

Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562

  • Bo Zhou
  • Steve S. Ho
  • Stephanie U. Greer
  • Xiaowei Zhu
  • John M. Bell
  • Joseph G. Arthur Noah Spies Xianglong Zhang Seunggyu Byeon Reenal Pattni Noa Ben-Efraim Michael S. Haney Rajini R. Haraksingh Giltae Song Hanlee P. Ji
  • ... [+10 authors] ...,
  • Dimitri Perrin
  • Wing H. Wong
  • Alexej Abyzov
  • Alexander E. Urban
  • First Published February 8, 2019
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Research

Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

  • Alexis Battle
  • Sara Mostafavi
  • Xiaowei Zhu
  • James B. Potash
  • Myrna M. Weissman
  • Courtney McCormick Christian D. Haudenschild Kenneth B. Beckman Jianxin Shi Rui Mei
  • ... [+5 authors] ...,
  • Alexander E. Urban
  • Stephen B. Montgomery
  • Douglas F. Levinson
  • Daphne Koller
  • First Published October 3, 2013
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Resource

CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

  • Alexej Abyzov
  • Alexander E. Urban
  • Michael Snyder
  • Mark Gerstein
  • First Published February 7, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
LETTER

Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history

  • Philip M. Kim
  • Hugo Y.K. Lam
  • Alexander E. Urban
  • Jan O. Korbel
  • Jason Affourtit
  • Fabian Grubert
  • ... [+1 authors] ...,
  • Xueying Chen
  • Sherman Weissman
  • Michael Snyder
  • Mark B. Gerstein
  • First Published October 8, 2008
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