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Research

Discovery of noncanonical translation initiation sites through mass spectrometric analysis of protein N termini

  • Chan Hyun Na
  • Mustafa A. Barbhuiya
  • Min-Sik Kim
  • Steven Verbruggen
  • Stephen M. Eacker
  • Olga Pletnikova Juan C. Troncoso
  • ... [+2 authors] ...,
  • Marc K. Halushka
  • Gerben Menschaert
  • Christopher M. Overall
  • Akhilesh Pandey
  • First Published November 21, 2017
Resource

Toward the human cellular microRNAome

  • Matthew N. McCall
  • Min-Sik Kim
  • Mohammed Adil
  • Arun H. Patil
  • Yin Lu
  • Christopher J. Mitchell Pamela Leal-Rojas Jinchong Xu Manoj Kumar Valina L. Dawson Ted M. Dawson Alexander S. Baras Avi Z. Rosenberg
  • ... [+8 authors] ...,
  • Dan E. Arking
  • Kathleen H. Burns
  • Akhilesh Pandey
  • Marc K. Halushka
  • First Published September 6, 2017
Method

Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes

  • T.S. Keshava Prasad
  • Ajeet Kumar Mohanty
  • Manish Kumar
  • Sreelakshmi K. Sreenivasamurthy
  • Gourav Dey
  • Raja Sekhar Nirujogi Sneha M. Pinto Anil K. Madugundu Arun H. Patil Jayshree Advani Srikanth S. Manda Manoj Kumar Gupta Sutopa B. Dwivedi Dhanashree S. Kelkar Brantley Hall Xiaofang Jiang Ashley Peery Pavithra Rajagopalan Soujanya D. Yelamanchi Hitendra S. Solanki Remya Raja Gajanan J. Sathe Sandip Chavan Renu Verma Krishna M. Patel Ankit P. Jain Nazia Syed Keshava K. Datta Aafaque Ahmed Khan Manjunath Dammalli Savita Jayaram Aneesha Radhakrishnan Christopher J. Mitchell Chan-Hyun Na Nirbhay Kumar Photini Sinnis Igor V. Sharakhov Charles Wang
  • ... [+33 authors] ...,
  • Harsha Gowda
  • Zhijian Tu
  • Ashwani Kumar
  • Akhilesh Pandey
  • First Published November 15, 2016
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Research

Widespread somatic L1 retrotransposition occurs early during gastrointestinal cancer evolution

  • Adam D. Ewing
  • Anthony Gacita
  • Laura D. Wood
  • Florence Ma
  • Dongmei Xing
  • Min-Sik Kim Srikanth S. Manda Gabriela Abril Gavin Pereira Alvin Makohon-Moore Leendert H.J. Looijenga Ad J.M. Gillis Ralph H. Hruban Robert A. Anders Katharine E. Romans Akhilesh Pandey Christine A. Iacobuzio-Donahue
  • ... [+12 authors] ...,
  • Bert Vogelstein
  • Kenneth W. Kinzler
  • Haig H. Kazazian
  • Szilvia Solyom
  • First Published August 10, 2015
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Research

Anopheles gambiae using high-resolution Fourier transform mass spectrometry" > A proteogenomic analysis of Anopheles gambiae using high-resolution Fourier transform mass spectrometry

  • Raghothama Chaerkady
  • Dhanashree S. Kelkar
  • Babylakshmi Muthusamy
  • Kumaran Kandasamy
  • Sutopa B. Dwivedi
  • Nandini A. Sahasrabuddhe Min-Sik Kim Santosh Renuse Sneha M. Pinto Rakesh Sharma Harsh Pawar Nirujogi Raja Sekhar Ajeet Kumar Mohanty Derese Getnet Yi Yang Jun Zhong Aditya P. Dash Robert M. MacCallum Bernard Delanghe Godfree Mlambo Ashwani Kumar
  • ... [+16 authors] ...,
  • T.S. Keshava Prasad
  • Mobolaji Okulate
  • Nirbhay Kumar
  • Akhilesh Pandey
  • First Published July 27, 2011
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
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