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Method

Highly accurate assembly polishing with DeepPolisher

  • First Published May 19, 2025
Perspective

Notable challenges posed by long-read sequencing for the study of transcriptional diversity and genome annotation

  • First Published March 3, 2025
Research

Gaps and complex structurally variant loci in phased genome assemblies

  • First Published May 10, 2023
Research

Comparative transcriptomics of primary cells in vertebrates

  • First Published July 27, 2020
Resource

Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci

  • First Published September 19, 2019
Research

The frequent evolutionary birth and death of functional promoters in mouse and human

  • First Published July 30, 2015
Resource

Digital expression profiling of the compartmentalized translatome of Purkinje neurons

  • First Published June 5, 2014
Perspective

Functional transcriptomics in the post-ENCODE era

  • First Published October 30, 2013
Method

Combining RT-PCR-seq and RNA-seq to catalog all genic elements encoded in the human genome

  • First Published September 5, 2012
Resource

GENCODE: The reference human genome annotation for The ENCODE Project

  • First Published September 5, 2012
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